DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and F52H3.6

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_496167.1 Gene:F52H3.6 / 174561 WormBaseID:WBGene00009948 Length:329 Species:Caenorhabditis elegans


Alignment Length:283 Identity:111/283 - (39%)
Similarity:164/283 - (57%) Gaps:18/283 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KCKYLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQFYDLEQLFRTGGQVPHTNYIFM 77
            :|  :.|.::..:.|....|||.:..::.|..|:.||||||||:.||.::|......|..||:|:
 Worm    24 RC--INEADIDVVIEKCTKILLAQATMVEVQAPIAVCGDIHGQYTDLLRIFNRCSFPPDQNYLFL 86

  Fly    78 GDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYGNA--NGWKYC 140
            ||:||||...||....|:..|.|||:|..:||||||...|.:.|||:|||..:|..|  |.::  
 Worm    87 GDYVDRGRQQLEVICLLMAYKIRYPNRFFILRGNHECASINRTYGFYDECKRRYSLALYNDFQ-- 149

  Fly   141 CKVFDLLTIAAIIDEEVLCVHGGLSPEIITLDQIRTIDRNGEIPYKGAFCDLVWSDPE-DMEYWG 204
             .:|:.|.:.|:|...:.|:|||||.::::..|:..|.|..:.|......||:|:||| :|..|.
 Worm   150 -NLFNHLPLCAMISGRIFCMHGGLSQKLVSWTQLAEITRPFDPPNNSLAMDLLWADPENNMTGWA 213

  Fly   205 QSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNEGIKYMFDGKLVTVWSAPNYCYRCGNVAA- 268
            :|.||...:||.:|.|||....|::||.|.||:|.:|.::..|.:|||::|||.||....|.|| 
 Worm   214 ESSRGVSQIFGADVVKDFTEKMNIDLIARGHQVVQDGYEFFADKRLVTIFSAPKYCGEFDNNAAV 278

  Fly   269 -------ILSFETAEK--RQTKI 282
                   |:|||..:.  |:.||
 Worm   279 MIVDERLIVSFEILKPAIREVKI 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 111/283 (39%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 111/283 (39%)
F52H3.6NP_496167.1 MPP_superfamily 3..294 CDD:301300 108/274 (39%)
PP2Ac 26..295 CDD:197547 107/271 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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