DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and Ppp6c

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_598273.2 Gene:Ppp6c / 171121 RGDID:708460 Length:305 Species:Rattus norvegicus


Alignment Length:301 Identity:227/301 - (75%)
Similarity:268/301 - (89%) Gaps:0/301 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DVDKWIEDVKKCKYLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQFYDLEQLFRTGG 67
            |:||::|..::|||||||:||:||:.|||:||||:|:.|||||||||||||||||||.:||||||
  Rat     5 DLDKYVEIARQCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGG 69

  Fly    68 QVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYG 132
            |||.|||||||||||||||||||||.||.|||::|.||||||||||:||||:||||:|||.:|||
  Rat    70 QVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYG 134

  Fly   133 NANGWKYCCKVFDLLTIAAIIDEEVLCVHGGLSPEIITLDQIRTIDRNGEIPYKGAFCDLVWSDP 197
            |||.|:||.||||:||:||:|||::|||||||||:|.||||||||:||.|||:||||||||||||
  Rat   135 NANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDP 199

  Fly   198 EDMEYWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNEGIKYMFDGKLVTVWSAPNYCYR 262
            ||::.|..||||||||||..||.:|:.||||.|||||||||:||.|:|||.||||||||||||||
  Rat   200 EDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYR 264

  Fly   263 CGNVAAILSFETAEKRQTKIFLAVPDAERVIPKQNTTPYFL 303
            |||:|:|:.|:....|:.|:|.||||:|||||.:.||||||
  Rat   265 CGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTPYFL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 225/299 (75%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 213/283 (75%)
Ppp6cNP_598273.2 MPP_PP2A_PP4_PP6 5..289 CDD:277360 213/283 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353392
Domainoid 1 1.000 339 1.000 Domainoid score I1069
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68273
Inparanoid 1 1.050 502 1.000 Inparanoid score I1304
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D349967at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 1 1.000 - - oto97311
orthoMCL 1 0.900 - - OOG6_103044
Panther 1 1.100 - - LDO PTHR45619
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2805
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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