DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marf and Dnm3

DIOPT Version :10

Sequence 1:NP_572320.2 Gene:Marf / 31581 FlyBaseID:FBgn0029870 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_612547.1 Gene:Dnm3 / 171574 RGDID:727949 Length:869 Species:Rattus norvegicus


Alignment Length:782 Identity:139/782 - (17%)
Similarity:255/782 - (32%) Gaps:276/782 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 KVAFFGRTSNGKSSVINAMLREKILPSGIGHTT-------------------NC-------FCQV 177
            ::|..|..|.|||||:...:....||.|.|..|                   :|       |.:|
  Rat    33 QIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVTSKAEYAEFLHCKGKKFTDFDEV 97

  Fly   178 EGSNGGEAYLMTEGSEEKLNVVNIKQLANALCQEKLCESSLVRIFWPRERCSLLRDDVVFVDSPG 242
            ......|...:| |..:.::.|.|.                :|::.|...      ::..:|.||
  Rat    98 RHEIEAETDRVT-GMNKGISSVPIN----------------LRVYSPHVL------NLTLIDLPG 139

  Fly   243 V----------DVSANLDDWIDNHCLNADVFVLVLNAESTMTRAEKQFFHTVSQKLSKP------ 291
            :          |:...:.|.|.......:..:|      .:|.|.....::.:.||:|.      
  Rat   140 ITKVPVGDQPPDIEYQIRDMIMQFITRENCLIL------AVTPANTDLANSDALKLAKEVDPQGL 198

  Fly   292 ---NIFILNNRWDASANEPECQESELAKVKS------QHTERCIDFLTKELKVSNEKEAAERVFF 347
               .:....:..|...:..:..|::|..::.      ..:::.||. .|::|.:   ..|||.||
  Rat   199 RTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDG-KKDIKAA---MLAERKFF 259

  Fly   348 VSARETLQARIEEAKGNPPHMGAIAEGFQIRYFEFQDFERKFEECISQSAVKTKFQQH------S 406
            :|  ......|.:..|. ||:                          |..:..:...|      :
  Rat   260 LS--HPAYRHIADRMGT-PHL--------------------------QKVLNQQLTNHIRDTLPN 295

  Fly   407 SRGKSVSGDMKSMLDNIYERITIFRNLKQDQKNLLTERIQGTETQMMQVTREMKMKIHNMVEEVE 471
            .|.|     ::..|.:|...:..|:|.|.:.....|:.:    .||:|          ....:.|
  Rat   296 FRNK-----LQGQLLSIEHEVEAFKNFKPEDPTRKTKAL----LQMVQ----------QFAVDFE 341

  Fly   472 EKVSKALNEEIWRLGVLID--------EFNMPFHPERLVLNIYKKELNAHVESGLGSNLRARLSM 528
            :::..:        |..:|        :.|..|| ||....|.|.|.|.       ..||..:|.
  Rat   342 KRIEGS--------GDQVDTLELSGGAKINRIFH-ERFPFEIVKMEFNE-------KELRREISY 390

  Fly   529 ALAMNVESAQTEMTDRMHALVPNEQLLATSTKMVVRTQ-PF---------EMLYSL-NCQNLCAD 582
            |: .|:...:|.:      ..|:....|...|.:|:.: |.         |::.:: .|....|:
  Rat   391 AI-KNIHGIRTGL------FTPDMAFEAIVKKQIVKLKGPSLKSVDLVMQELINTVKKCTKRLAN 448

  Fly   583 FQ---EDLEFKFSWGIAAMIQRFTGKVRERSKKGQPALV------------NRQSSIGHSVSTPT 632
            |.   |:.|           :.....:|||..|.:..::            |.:..||.:.:...
  Rat   449 FPRLCEETE-----------RIVANHIREREGKTKDQVLLLIDIQVSYINTNHEDFIGFANAQQR 502

  Fly   633 TTPVEATPVCLLPAPVVAGITPEQLSLISRFAVSSIGSQGTVGGLVVAGVMLKTIGWRVLVGVGA 697
            ::.|...                          |:||:|||  .|..:..::...||..:..:|.
  Rat   503 SSQVHKK--------------------------STIGNQGT--NLPPSRQIVIRKGWLTVSNIGI 539

  Fly   698 L------YGCIYLYERLSW--TNSAKERTF-------------------KSQYVRHATKKLKMIV 735
            :      |..:...|.|||  .:..||:.:                   |..:....|::..:..
  Rat   540 MKGGSKGYWFVLTAESLSWYKDDEEKEKKYMLPLDNLKVRDVEKGFMSSKHVFALFNTEQRNVYK 604

  Fly   736 DLTSANCSHQVQQELSSTFARLCRT---VDTATTDMNDELK-----TLDSQLNILEANQKQLKLL 792
            |..|...:...|:::.|..|.|.|.   .|.:.|: |||..     ::|.||      ::|::.:
  Rat   605 DYRSLELACDSQEDVDSWKASLLRAGVYPDKSFTE-NDENGQAENFSMDPQL------ERQVETI 662

  Fly   793 RN 794
            ||
  Rat   663 RN 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MarfNP_572320.2 DLP_2 138..393 CDD:206739 52/304 (17%)
Fzo_mitofusin 654..811 CDD:461432 37/176 (21%)
Dnm3NP_612547.1 DYNc 6..245 CDD:197491 40/241 (17%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 38..45 3/6 (50%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 64..66 0/1 (0%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 136..139 1/2 (50%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 205..208 0/2 (0%)
Dynamin_M 215..502 CDD:460033 65/372 (17%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 235..238 0/2 (0%)
PH_dynamin 526..635 CDD:269958 19/108 (18%)
GED 655..745 CDD:460495 4/16 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 752..869
MISS <753..841 CDD:318115
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.