DRSC/TRiP Functional Genomics Resources

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Protein Alignment kdn and CIT2

DIOPT Version :9

Sequence 1:NP_727091.1 Gene:kdn / 31579 FlyBaseID:FBgn0261955 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_009931.1 Gene:CIT2 / 850361 SGDID:S000000598 Length:460 Species:Saccharomyces cerevisiae


Alignment Length:445 Identity:259/445 - (58%)
Similarity:339/445 - (76%) Gaps:1/445 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 NVGAYVRMIAADGKSLRDVLAAKVPQEQERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTET 141
            ||.:|::..::..|:|::..:...|...:.|:.|.|:||.||:.:..::.:|||||||...|.|.
Yeast    11 NVASYLQSNSSQEKTLKERFSEIYPIHAQDVRQFVKEHGKTKISDVLLEQVYGGMRGIPGSVWEG 75

  Fly   142 SVLDADEGIRFRGLSIPECQKVLPAADGGTEPLPEGLFWLLLTGEVPTKSQVQQLSREWAERAAL 206
            ||||.::||||||.:|.:.||.||.|.|.::||||.||||||||||||::||:.||.:...|:.|
Yeast    76 SVLDPEDGIRFRGRTIADIQKDLPKAKGSSQPLPEALFWLLLTGEVPTQAQVENLSADLMSRSEL 140

  Fly   207 PQHVVTMLNNMPTTLHPMSQFAAAVTALNHDSKFAKAYSDGVHKSKYWEYVYEDSMDLIAKLPVV 271
            |.|||.:|:|:|..||||:||:.|||||..:|||||||:.|:.|..||.|.:|||:||:.||||:
Yeast   141 PSHVVQLLDNLPKDLHPMAQFSIAVTALESESKFAKAYAQGISKQDYWSYTFEDSLDLLGKLPVI 205

  Fly   272 AATIYCNTYRGGKGSRSIDSSLDWSANFVKMLGYDNAPFTELMRLYLTIHSDHEGGNVSAHTVHL 336
            ||.||.|.::.|| ...:|.:.|::.|.|.::|..:..|.:|||||||||||||||||||||.||
Yeast   206 AAKIYRNVFKDGK-MGEVDPNADYAKNLVNLIGSKDEDFVDLMRLYLTIHSDHEGGNVSAHTSHL 269

  Fly   337 VGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVWLRKLQKEAGNNPSEEQLKEYIWKTLKSGQVV 401
            ||||||.||||.|:|||||||||||.||||||.||..|::|..::.|::.:::|:|.||.||:|:
Yeast   270 VGSALSSPYLSLASGLNGLAGPLHGRANQEVLEWLFALKEEVNDDYSKDTIEKYLWDTLNSGRVI 334

  Fly   402 PGYGHAVLRKTDPRYTCQREFALKHLPEDETFQLVSKIYKVVPPILTETGKVKNPWPNVDAHSGV 466
            |||||||||||||||..||:||:.|.|:.|.|:|||.||:|.|.:|||.||.|||||||||||||
Yeast   335 PGYGHAVLRKTDPRYMAQRKFAMDHFPDYELFKLVSSIYEVAPGVLTEHGKTKNPWPNVDAHSGV 399

  Fly   467 LLQYYGMKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERPKSFSTDLLVKMVQ 521
            ||||||:||.::||||||||||.|:||.|:.|||:|..||||||:||:...::|:
Yeast   400 LLQYYGLKESSFYTVLFGVSRAFGILAQLITDRAIGASIERPKSYSTEKYKELVK 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kdnNP_727091.1 PLN02456 89..513 CDD:215250 253/423 (60%)
ScCit1-2_like 92..519 CDD:99858 254/426 (60%)
CIT2NP_009931.1 CS_ACL-C_CCL 26..452 CDD:412368 254/426 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 522 1.000 Domainoid score I40
eggNOG 1 0.900 - - E1_COG0372
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56073
Inparanoid 1 1.050 567 1.000 Inparanoid score I156
Isobase 1 0.950 - 0 Normalized mean entropy S189
OMA 1 1.010 - - QHG54065
OrthoFinder 1 1.000 - - FOG0002348
OrthoInspector 1 1.000 - - otm46747
orthoMCL 1 0.900 - - OOG6_101425
Panther 1 1.100 - - O PTHR11739
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2045
TreeFam 1 0.960 - -
1413.780

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