DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kdn and CG14740

DIOPT Version :9

Sequence 1:NP_727091.1 Gene:kdn / 31579 FlyBaseID:FBgn0261955 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_650152.1 Gene:CG14740 / 41468 FlyBaseID:FBgn0037988 Length:478 Species:Drosophila melanogaster


Alignment Length:435 Identity:229/435 - (52%)
Similarity:317/435 - (72%) Gaps:1/435 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 GKSLRDVLAAKVPQEQERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTETSVLDADEGIRFR 153
            |..|:..||.|:|.|:|:....:..||...:|:.:::.:.|||||:..|..|||.||.::||.:|
  Fly    30 GSGLKAKLAKKIPIEREKFLGIKCLHGKKIIGQISVNSVIGGMRGLPLLFCETSSLDKNKGIYYR 94

  Fly   154 GLSIPE-CQKVLPAADGGTEPLPEGLFWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNM 217
            |..:.: |.|:....:|..|..|||.|:||.:|.:|||.:.|:::.||.:|.::|::.:.|:::|
  Fly    95 GKLLKDVCAKLPRVQEGTQEGTPEGCFFLLTSGSMPTKKEAQEVTNEWLKRGSVPRYCLRMIDSM 159

  Fly   218 PTTLHPMSQFAAAVTALNHDSKFAKAYSDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYCNTYRG 282
            ...:|||:|..||...||..|:|.:||:.|..::.||:|.|||||:|||.||.|||.||.|.:|.
  Fly   160 DKRVHPMAQLCAASACLNPQSQFVEAYTKGARRADYWKYSYEDSMNLIAMLPTVAAAIYSNVFRD 224

  Fly   283 GKGSRSIDSSLDWSANFVKMLGYDNAPFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLS 347
            |:|||.::...|||.||.:|||.....|.:|||||:.:|:|||.||||||..||||:|||||:||
  Fly   225 GEGSREVNYEEDWSGNFCRMLGLPEKDFVDLMRLYMILHADHESGNVSAHACHLVGTALSDPFLS 289

  Fly   348 FAAGLNGLAGPLHGLANQEVLVWLRKLQKEAGNNPSEEQLKEYIWKTLKSGQVVPGYGHAVLRKT 412
            |:|.:.||||||||||||||||||.||:|..|::||:|:||::|..|||.|||:|||||||||.|
  Fly   290 FSASMCGLAGPLHGLANQEVLVWLTKLRKAIGDDPSDEELKKFIDDTLKGGQVIPGYGHAVLRDT 354

  Fly   413 DPRYTCQREFALKHLPEDETFQLVSKIYKVVPPILTETGKVKNPWPNVDAHSGVLLQYYGMKEMN 477
            |||:..|.|||:||..:|...:||::::|::|.:|.:..||.||:||||||||||||:|.:||:.
  Fly   355 DPRFVLQNEFAMKHCKDDPGVKLVTRLWKIIPEVLKKLNKVANPYPNVDAHSGVLLQHYCLKELK 419

  Fly   478 YYTVLFGVSRALGVLASLVWDRALGLPIERPKSFSTDLLVKMVQK 522
            :||||||||||||||:.|:|.||||.|||||||||:..:.|.:.:
  Fly   420 FYTVLFGVSRALGVLSQLIWSRALGAPIERPKSFSSIEICKFINE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kdnNP_727091.1 PLN02456 89..513 CDD:215250 227/424 (54%)
ScCit1-2_like 92..519 CDD:99858 227/427 (53%)
CG14740NP_650152.1 ScCS-like 33..458 CDD:99857 227/424 (54%)
GltA 67..454 CDD:223449 215/386 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466214
Domainoid 1 1.000 111 1.000 Domainoid score I301
eggNOG 1 0.900 - - E1_COG0372
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I283
Isobase 1 0.950 - 0 Normalized mean entropy S189
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1131452at2759
OrthoFinder 1 1.000 - - FOG0002348
OrthoInspector 1 1.000 - - mtm9761
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11739
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.850

Return to query results.
Submit another query.