DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3847 and CG17806

DIOPT Version :10

Sequence 1:NP_572317.2 Gene:CG3847 / 31577 FlyBaseID:FBgn0029867 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster


Alignment Length:337 Identity:67/337 - (19%)
Similarity:116/337 - (34%) Gaps:122/337 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 DDDDTETAVVTLSDRDHEALVNAEEV-IIDENGHAVTLQELVENSTVEEETIEQGDGTHTILHIV 120
            :|.|||||....::| .|:.|:...: |.......:..|...:...|..:|:|    |.....:|
  Fly    81 EDSDTETAREGGNNR-LESRVDVMPISIAQPQRRRILPQRSKKVDGVPLKTVE----TPIYPLVV 140

  Fly   121 PNIHGEEVEEDEELEDGEEVEHDDEF------VTVDHE--GGEL-EVEDDE------VGSIV--- 167
            |.|...::.:....||..:|:.:.:.      .:::||  ..|: :|..:|      :|.:.   
  Fly   141 PEIPPADLVDPLRCEDPIQVKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTLQVIGEVQKNR 205

  Fly   168 ----------------------FESTIDHAEQDPYG-RNK-------------TFYCPNCGNCYS 196
                                  .:||.:..:::.|. |||             .::|..||..:|
  Fly   206 RKPRSKGCLEECPGKDMAKIENIDSTTNKTKEEKYATRNKWGAAKRAYALEHRLYFCDQCGKTFS 270

  Fly   197 AAGSLKLHMRA-----------------------------------------------CLRQRNE 214
            ..|:..:|:|.                                               ||::.|.
  Fly   271 EKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRGELPYVCKYCGKRFDNCLKRLNH 335

  Fly   215 ISTDERK-----------CKVCSKVFNSVAYLKEHMMRHTGEQPFRCTRCYRKFVEESKFTAHME 268
                ||.           |..|.|.|.:...||:|::.|||||||.|..|...|...:....|.:
  Fly   336 ----ERNHKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRNALATHYK 396

  Fly   269 SHKHQDKLEAEA 280
            |..|:.|:|.::
  Fly   397 SKHHRLKVEEQS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3847NP_572317.2 C2H2 Zn finger 188..216 CDD:275368 10/74 (14%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 4/19 (21%)
CG17806NP_650658.1 zf-AD 4..75 CDD:462262
zf-C2H2 260..282 CDD:395048 7/21 (33%)
C2H2 Zn finger 262..282 CDD:275368 7/19 (37%)
C2H2 Zn finger 290..311 CDD:275368 0/20 (0%)
C2H2 Zn finger 319..339 CDD:275368 5/23 (22%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
ZnF_U1 375..407 CDD:197732 10/31 (32%)
C2H2 Zn finger 378..396 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.