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Protein Alignment CG3847 and CG6689

DIOPT Version :10

Sequence 1:	NP_572317.2	Gene:	CG3847 / 31577	FlyBaseID:	FBgn0029867	Length:	380	Species:	Drosophila melanogaster
Sequence 2:	NP_650051.1	Gene:	CG6689 / 41345	FlyBaseID:	FBgn0037877	Length:	613	Species:	Drosophila melanogaster

Alignment Length:	355	Identity:	82/355 - (23%)
Similarity:	130/355 - (36%)	Gaps:	101/355 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    74 EALVNAEEVIID-ENGHAVTL-QELV---ENSTVEEETIEQGDGTHTILHIVPNIHGEEVEEDEE 133
            :|..:.:||.|: ||.:.::. .:|:   ||:.|||  ||...|.|             ||::..
  Fly   240 QAKPSTDEVQIEAENENPISSDHDLISDTENTNVEE--IEDAGGDH-------------VEDEAT 289

  Fly   134 LEDGEEVEHDDEFVTVDHEGGELEVEDDEVGSIVFESTIDH--------------------AEQD 178
            .:|....|..||..........|.|   .:|:.:|:..:|.                    |::.
  Fly   290 SDDQTSQEAVDEVAESPAAQDPLSV---ALGAKIFKELLDQYTGKEKARLRKGAPIASKPKAKEK 351

  Fly   179 PYGRNK--------------------------TFYCPNCGNCYSAAGSLKLHMRACLRQRNEIST 217
            ..|..|                          .|.|..||..:..:.:|::||....|.:|
  Fly   352 AAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKN---- 412

  Fly   218 DERKCKVCSKVFNSVAYLKE-HM-MRHTGEQPFRCTRCYRKFVEESKFTAHMESHKHQDKLEAEA 280
              .:|..|.|.|.. ||::. |: :||.||.||.|..|...|....      ...||:.::...|
  Fly   413 --YQCTECPKTFYD-AYMRNMHIRIRHRGETPFACGFCSETFAYPG------ARQKHESEVHNAA 468

  Fly   281 VALAAQHGGKKVVVK-----EFQCAFCSQNFTVVFDVG-QVK-----RRYACDACRDKYSNAEAL 334
            ..|..:....|.:.|     .:||..|.:::...:.:| .:|     ..|.|..|...||:...|
  Fly   469 PRLIVKRINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKL 533

  Fly   335 RQHKQQVEEKREFSCVRCGRKFVFEGFLQR 364
            ::| :...|||...|..|     .:||.||
  Fly   534 KRH-EMTHEKRPLQCDVC-----LKGFYQR 557

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.