DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3847 and znf1113

DIOPT Version :10

Sequence 1:NP_572317.2 Gene:CG3847 / 31577 FlyBaseID:FBgn0029867 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001314951.1 Gene:znf1113 / 100330526 ZFINID:ZDB-GENE-110913-161 Length:321 Species:Danio rerio


Alignment Length:253 Identity:65/253 - (25%)
Similarity:109/253 - (43%) Gaps:46/253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 EEVEEDEELEDGEEVEHDDEFVTVD----HEGGELE---VEDDEVGSIVFESTIDHAEQDPYGRN 183
            :|..||.::|:...|:.:|.....|    :||.:.|   |:.:|...:..:..:...:::     
Zfish     5 KEESEDVKIEETFTVKQEDPQEQTDLIEEYEGSKQEEHHVKIEEKTHLQTDGVLKRRDKN----- 64

  Fly   184 KTFYCPNCGNCYSAAGSLKLHMRACLRQRNEISTDERKCKVCSKVFNSVAYLKEHMMRHTGEQPF 248
             .|.|..||..:...|.|::|||  :....:|||    |..|.|.|....:||.|||.||||:||
Zfish    65 -RFTCTQCGRSFGRKGDLRIHMR--IHTGEKIST----CTQCGKSFGRKDHLKIHMMIHTGEKPF 122

  Fly   249 RCTRCYRKFVEESKFTAHMESHKHQDKLEAEAVALAAQHGGKKVVVKEFQCAFCSQNFTVVFDVG 313
            .||:|.:.|...|....||..|..:                     |.|.|..|.::|:.:..:.
Zfish   123 TCTQCGKSFSYSSHLNEHMRIHTGE---------------------KPFTCTQCGKSFSHLSSLN 166

  Fly   314 Q------VKRRYACDACRDKYSNAEALRQHKQQVEEKREFSCVRCGRKFVFEGFLQRH 365
            |      .::.:.|..|...:.::..|:||.:....::.|:|.:||:.|.....|..|
Zfish   167 QHIRIHTGEKPFTCTQCGKSFRHSLILKQHIRIHTGEKPFTCTQCGKSFRQSSSLNYH 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3847NP_572317.2 C2H2 Zn finger 188..216 CDD:275368 8/27 (30%)
C2H2 Zn finger 222..242 CDD:275368 9/19 (47%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
znf1113NP_001314951.1 C2H2 Zn finger 68..88 CDD:275368 8/21 (38%)
C2H2 Zn finger 96..116 CDD:275368 9/19 (47%)
COG5048 <120..280 CDD:227381 28/126 (22%)
C2H2 Zn finger 124..144 CDD:275368 7/19 (37%)
C2H2 Zn finger 152..172 CDD:275368 4/19 (21%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
C2H2 Zn finger 208..228 CDD:275368 6/17 (35%)
C2H2 Zn finger 236..251 CDD:275368
C2H2 Zn finger 264..284 CDD:275368
zf-H2C2_2 276..299 CDD:463886
C2H2 Zn finger 292..312 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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