DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and AT5G50130

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_568721.1 Gene:AT5G50130 / 835078 AraportID:AT5G50130 Length:339 Species:Arabidopsis thaliana


Alignment Length:266 Identity:97/266 - (36%)
Similarity:137/266 - (51%) Gaps:28/266 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 IVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRN 142
            |:||..:|||.||...|||||.||.||.||..:.|..:..|:..:....:....:||.||.||..
plant    40 IITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVAR 104

  Fly   143 FVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFLLTNLLLDRL-----KHSSP 202
            |..:|.:::..|:||||||||.:.....:.:..|..|..|.|||:|||.:|::::     |....
plant   105 FCSQFLSQDLPLNILINNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIE 169

  Fly   203 SRIVVVSSAAHLFGRINREDLMSEKN----YSKFFG--AYSQSKLANILFTLKLSTILKD--TGV 259
            .||:.:||..|.:   .:.|..|...    .|::.|  ||:|||||.||....||..|||  ..|
plant   170 GRIINLSSVIHNW---VKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANV 231

  Fly   260 TVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLY-----FFKTPKAGAQTQLRLALDPQLEGSTG 319
            |:|..|||:|:|.|.|...|       |...||:     ..|:...||.|...:||..:.:|.:|
plant   232 TINAVHPGIVKTGIIRAHKG-------LFTDSLFLIASKLLKSISQGAATTCYVALSNETKGLSG 289

  Fly   320 GYYSDC 325
            .|::||
plant   290 KYFADC 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 93/258 (36%)
NADB_Rossmann 74..347 CDD:304358 97/266 (36%)
AT5G50130NP_568721.1 retinol-DH_like_SDR_c_like 38..313 CDD:212492 97/266 (36%)
adh_short 38..245 CDD:278532 80/207 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D921996at2759
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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