DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and AT5G02540

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_568102.1 Gene:AT5G02540 / 831913 AraportID:AT5G02540 Length:331 Species:Arabidopsis thaliana


Alignment Length:289 Identity:117/289 - (40%)
Similarity:161/289 - (55%) Gaps:24/289 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 IVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRN 142
            |:||...|||.||...|:||||.|.:..|:.|..|.|:.:|:.::.|.::....|||.|::|::.
plant    37 IITGGTGGIGMETARVLSKRGAHVVIGARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKA 101

  Fly   143 FVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFLLTNLLLDRLKHSSPS---- 203
            ||..|.|....|::||||||||.||..|:.||.|.||..||:|||||||||||.:|:::.:    
plant   102 FVREFHALHLPLNLLINNAGVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVE 166

  Fly   204 -RIVVVSSAAHL--------FGRINREDLMSEKNYSKFFGAYSQSKLANILFTLKLSTILKDTGV 259
             ||:.|||.||:        |..||.....|:|.      ||.||||||||...:||..|::.||
plant   167 GRILNVSSVAHIYTYQEGIQFDSINDICSYSDKR------AYGQSKLANILHANELSRQLQEEGV 225

  Fly   260 --TVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFFKTPKAGAQTQLRLALDPQLEGSTGGYY 322
              |.|..|||::.|.:.:|   ...:...|:..|.|.:|....||.|...:||.|.::|.||.|:
plant   226 NITANSVHPGLILTNLFQH---TALLMRFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYF 287

  Fly   323 SDCMRWPLFPWVRNMQTADWLWRESEKLL 351
            :||.........|:...|..||..|.||:
plant   288 ADCNEVTPSKLARDETLAQKLWDFSVKLI 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 105/255 (41%)
NADB_Rossmann 74..347 CDD:304358 114/283 (40%)
AT5G02540NP_568102.1 PRK06196 14..315 CDD:235736 115/286 (40%)
retinol-DH_like_SDR_c_like 48..309 CDD:212492 106/269 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 171 1.000 Domainoid score I1148
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I1212
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D921996at2759
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.780

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