DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and AT4G23420

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001190811.1 Gene:AT4G23420 / 828441 AraportID:AT4G23420 Length:333 Species:Arabidopsis thaliana


Alignment Length:292 Identity:117/292 - (40%)
Similarity:159/292 - (54%) Gaps:23/292 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 GKVVIVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARLDIMDRSRNQQLFNRTLDLGSLQ 138
            |...||||.::|||.||...||.||..|.||.|:.|.....:.||:.:....::....|:|.|::
plant    46 GLTAIVTGASSGIGVETARVLALRGVHVVMAVRNTGAGAKVKEDIVKQVPGAKVDVMELELSSME 110

  Fly   139 SVRNFVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFLLTNLLLDRLKHSS-- 201
            |||.|...:|:....|::||||||:||||..|:.|..|.||..|||||||||.||||.:|::|  
plant   111 SVRKFASEYKSAGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKNTSRE 175

  Fly   202 ---PSRIVVVSSAAH--------LFGRINREDLMSEKNYSKFFGAYSQSKLANILFTLKLSTILK 255
               ..|||.|||.||        .|.:||     .|.:||. ..||.||||.|:|...:|:..||
plant   176 SKREGRIVNVSSEAHRYSYPEGVRFDKIN-----DESSYSS-IRAYGQSKLCNVLHANELAKQLK 234

  Fly   256 DTGV--TVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFFKTPKAGAQTQLRLALDPQLEGST 318
            :.||  |.|..|||.:.|.:..:|:  .::..|:...:.|..|:...||.|...:||:||:.|.|
plant   235 EDGVNITANSLHPGAIMTNLWGYFN--SYLAGAVGAVAKYMVKSVPQGAATTCYVALNPQVAGVT 297

  Fly   319 GGYYSDCMRWPLFPWVRNMQTADWLWRESEKL 350
            |.|:||.........|::.:.|..||..|.||
plant   298 GEYFSDSNIAKPIELVKDTELAKKLWDFSTKL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 105/259 (41%)
NADB_Rossmann 74..347 CDD:304358 114/287 (40%)
AT4G23420NP_001190811.1 PRK06197 43..331 CDD:235737 117/292 (40%)
retinol-DH_like_SDR_c_like 46..323 CDD:212492 112/284 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 171 1.000 Domainoid score I1148
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I1212
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D921996at2759
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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