DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG3842 and Rdh14

DIOPT Version :9

Sequence 1:	NP_001259270.1	Gene:	CG3842 / 31576	FlyBaseID:	FBgn0029866	Length:	406	Species:	Drosophila melanogaster
Sequence 2:	NP_001102746.1	Gene:	Rdh14 / 500629	RGDID:	1565196	Length:	334	Species:	Rattus norvegicus

Alignment Length:	316	Identity:	150/316 - (47%)
Similarity:	190/316 - (60%)	Gaps:	17/316 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    54 MWLLRKCIQGPAYRK------ANRIDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRDPGRCE 112
            :||..:...|.:.::      ...:.||.|::||.|:|:|:.|..||.:.||||.|.|||..|.|
  Rat    18 LWLAARRFSGSSGQRRQGGGDPGLMHGKTVLITGANSGLGRATAGELLRLGARVIMGCRDRARAE 82

  Fly   113 AARLDIMDR----------SRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACP 167
            .|...:...          :.:.||..:.|||.||:|||.|.:....||.|||:|||||||..||
  Rat    83 EAAGQLRQELGQAGGLGPDATDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFQCP 147

  Fly   168 RTLTADGFEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYSKF 232
            .|.|.||||.|||||||||||||||||..||.|:|||||||||..:.:|.||.|||.||::|:|.
  Rat   148 YTKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKS 212

  Fly   233 FGAYSQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFFKT 297
            | .||:|||||||||.:|:..|:.|.||||..|||:|||.:.||...|...:......|..||||
  Rat   213 F-CYSRSKLANILFTRELAHRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKT 276

  Fly   298 PKAGAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPWVRNMQTADWLWRESEKLLGL 353
            |..||||.:.||..|.:||.:|.|:.||....|.|...:...|..||..||.::|:
  Rat   277 PLEGAQTSIYLASSPDVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 332

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3842	NP_001259270.1	FabG	71..319	CDD:223959	135/257 (53%)
CG3842	NP_001259270.1	NADB_Rossmann	74..347	CDD:304358	144/282 (51%)
Rdh14	NP_001102746.1	PRK06197	43..332	CDD:235737	146/289 (51%)
Rdh14	NP_001102746.1	NADB_Rossmann	44..326	CDD:304358	144/282 (51%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG1208
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H75139
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53570
OrthoDB	1	1.010	-	-		D414554at33208
OrthoFinder	1	1.000	-	-		FOG0000061
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100091
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X72
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.730