DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and hsd17b13

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001011240.1 Gene:hsd17b13 / 496682 XenbaseID:XB-GENE-995635 Length:300 Species:Xenopus tropicalis


Alignment Length:278 Identity:79/278 - (28%)
Similarity:113/278 - (40%) Gaps:62/278 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IFLIVLGILLFMWLLRKCIQGPAYRKANRIDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRD 107
            :||:.:.:..:|....|... |..||:  :.|.:|::||...|||:.|.||.||..:.:.:    
 Frog     8 MFLLFIAVYSYMESFVKLFL-PVNRKS--VAGNIVLITGSGHGIGRRTALEFAKHESILVL---- 65

  Fly   108 PGRCEAARLDIMDRSRNQQLFNRTLD----LGSLQ-------SVRNFV----ERFKAEESRLDIL 157
                    .||     ||:....|.|    ||:..       |.||.:    |:.|.:...:|||
 Frog    66 --------WDI-----NQKGVEETADECRKLGATAYAFVVDCSTRNDIYRCAEKVKQDIGDVDIL 117

  Fly   158 INNAGVMACPRTLTADG--FEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINR 220
            ||||||:.....|....  .|:.|.||.|.||..|...|..:.......||.|:|.|   |::..
 Frog   118 INNAGVVFGTEFLKLQDHQIEKTFSVNILAHFWTTKSFLSAMMKKDRGHIVTVASIA---GQLGV 179

  Fly   221 EDLMSEKNYSKFFGAYSQSKLANILF----TLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPG 281
            ..|:.          |..||...:.|    |.:|..:.|| ||...|..|..|.|...::.|...
 Frog   180 PYLVD----------YCASKFGLVGFHESLTSELKLLGKD-GVKTTCLCPVFVNTGFVQNPSTRV 233

  Fly   282 W--MKT-----ALQKGSL 292
            |  :||     .|.:|.|
 Frog   234 WPVLKTEDVVKCLMEGIL 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 72/247 (29%)
hsd17b13NP_001011240.1 17beta-HSDXI-like_SDR_c 38..277 CDD:187598 71/245 (29%)

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