DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3842 and dhrs13b.1

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001003510.1 Gene:dhrs13b.1 / 445116 ZFINID:ZDB-GENE-040801-253 Length:318 Species:Danio rerio


Alignment Length:316 Identity:137/316 - (43%)
Similarity:189/316 - (59%) Gaps:11/316 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LIVLGILLFMWL-LRKCIQGPAYRKANRIDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRDP 108
            |:::|||..::: :|..::|...:...::.||.|||||.|.|||:.|.::||:|||||.:|||..
Zfish     6 LLIVGILSVVFMAIRAYVRGAKCKSKVKLHGKTVIVTGSNVGIGRATAVDLARRGARVILACRSQ 70

  Fly   109 GRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRTLTAD 173
            .|.|.|...:...|.:|.:....|||.||:|||:|.|.|...|.|||||||||||.  .:..|.|
Zfish    71 VRGEVAVALVKRESGSQNVAFMQLDLASLKSVRSFAETFLKTEKRLDILINNAGVY--KQGTTED 133

  Fly   174 GFEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYS------KF 232
            ||...||||||||||||||||||||..:|||||.|||..|.:|.::.:.|.:.|.:.      ..
Zfish   134 GFGLMFGVNHLGHFLLTNLLLDRLKECAPSRIVTVSSIMHKYGTLDFDTLRTHKEFGVGETSRSI 198

  Fly   233 FGAYSQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFFKT 297
            |..|:.|||.|:|||.:|:..|:.|.||....|||.|.:::||:.|  ...:..::..:..|||.
Zfish   199 FWIYAHSKLCNVLFTHELAKRLQGTNVTCYSLHPGAVNSDLNRNLS--KMTRRLIKPITTLFFKD 261

  Fly   298 PKAGAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPWVRNMQTADWLWRESEKLLGL 353
            .:|||||.|..|:...:|..:|.|:|:|....:.|..::...|..||..||.|.||
Zfish   262 VEAGAQTSLYCAVQEGIESLSGRYFSNCAVQKVEPKAQDDAVAKKLWEVSETLSGL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 118/253 (47%)
NADB_Rossmann 74..347 CDD:304358 126/278 (45%)
dhrs13b.1NP_001003510.1 PRK06197 35..318 CDD:235737 131/287 (46%)
NADB_Rossmann 36..311 CDD:304358 126/278 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.