DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and rdh14b

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001040655.1 Gene:rdh14b / 334665 ZFINID:ZDB-GENE-030131-6605 Length:323 Species:Danio rerio


Alignment Length:324 Identity:160/324 - (49%)
Similarity:200/324 - (61%) Gaps:15/324 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 AVLIFLIVLGILLFMWLLRKCIQGPAYRKANRI--------DGKVVIVTGCNTGIGKETVLELAK 96
            |.::...|||..:| ::.|:.|   ..|||.|:        .||.|||||.|.||||.|..||.|
Zfish     3 AAVVLAAVLGGGVF-FIARRII---FRRKALRLMSYPPALMRGKTVIVTGANCGIGKATAAELLK 63

  Fly    97 RGARVYMACRDPGRCEAARLDIMDRSRNQQ--LFNRTLDLGSLQSVRNFVERFKAEESRLDILIN 159
            ..|||.|||||..|.|.|..||.:::...|  :..:.|||.||||||.|.|....||.|:|:|||
Zfish    64 LQARVIMACRDRQRAEDAARDIQNQAGTSQGEIVIKHLDLASLQSVRRFCEEVIREEPRIDVLIN 128

  Fly   160 NAGVMACPRTLTADGFEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLM 224
            |||:..||.:.|.:|||.|.||||||||||||||||.||.|||||:|||||..:.:|.||.|||.
Zfish   129 NAGLYQCPYSKTEEGFEMQLGVNHLGHFLLTNLLLDLLKQSSPSRVVVVSSKLYKYGSINFEDLN 193

  Fly   225 SEKNYSKFFGAYSQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPGWMKTALQK 289
            ||::|:|.| .||||||||:|||.:|:..|..|.||||...||:|||.:.||.:.|..:|.....
Zfish   194 SEQSYNKSF-CYSQSKLANLLFTRELARRLDGTEVTVNALTPGIVRTRLGRHVNIPLLIKPLFWL 257

  Fly   290 GSLYFFKTPKAGAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPWVRNMQTADWLWRESEKLLGL 353
            .|..|||:|..||||.|.||..|::||.:|..:::|....|.....:...|..||..||.::||
Zfish   258 VSWLFFKSPLEGAQTPLYLACSPEVEGVSGKCFANCEEEQLLSKATDDHAAKRLWDLSESMVGL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 140/257 (54%)
NADB_Rossmann 74..347 CDD:304358 145/274 (53%)
rdh14bNP_001040655.1 PRK06197 41..322 CDD:235737 149/282 (53%)
NADB_Rossmann 41..315 CDD:304358 145/274 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.730

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