DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and CG3603

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001259199.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster


Alignment Length:215 Identity:61/215 - (28%)
Similarity:101/215 - (46%) Gaps:46/215 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 GKVVIVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARLDIMD--RSRNQQLFNRTLDLGS 136
            |||.:|||..:|||:.|...||:.||:|....|:   .:||:..:.:  ..|:..|   .:|:.|
  Fly     8 GKVALVTGAGSGIGRATCRLLARDGAKVIAVDRN---LKAAQETVQELGSERSAAL---EVDVSS 66

  Fly   137 LQSVR-NFVERFKAEESRLDILINNAGVMACPRTLTADG---------FEQQFGVNHLGHFLLTN 191
            .|||: :..|..|..:....|::|:||:       |.||         ::..:|||..|.||:|.
  Fly    67 AQSVQFSVAEALKKFQQAPTIVVNSAGI-------TRDGYLLKMPERDYDDVYGVNLKGTFLVTQ 124

  Fly   192 -----LLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYSKFFGAYSQSKLANILFTLKLS 251
                 ::..:|::.:   ||.:||   :..::|.   :.:.|       |:.:|...|.||...|
  Fly   125 AYAKAMIEQKLENGT---IVNLSS---IVAKMNN---VGQAN-------YAATKAGVISFTEVAS 173

  Fly   252 TILKDTGVTVNCCHPGVVRT 271
            ......|:.|||..||.:.|
  Fly   174 KEFGKFGIRVNCILPGYIDT 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 61/215 (28%)
NADB_Rossmann 74..347 CDD:304358 61/215 (28%)
CG3603NP_001259199.1 fabG 6..248 CDD:235546 61/215 (28%)
BKR_SDR_c 9..248 CDD:187594 60/214 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447720
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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