DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and Dhrs13

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001385697.1 Gene:Dhrs13 / 303275 RGDID:1305508 Length:375 Species:Rattus norvegicus


Alignment Length:359 Identity:141/359 - (39%)
Similarity:202/359 - (56%) Gaps:13/359 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LIVLGILLFMWLL--RKCIQGPAYRKANRIDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRD 107
            |:..|:||..::|  ...::.|.......:.|:..:|||.|:||||.|.||||:|||||.:|||.
  Rat     5 LLGAGLLLGAYVLVYYNLVKAPPCGGIGSLRGRTAVVTGANSGIGKMTALELARRGARVVLACRS 69

  Fly   108 PGRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRTLTA 172
            ..|.|||..|:...|.|.::....|||.||.||:.|...|.:.|.||||||:|||:.:|.|  |.
  Rat    70 RERGEAAAFDLRQESGNNEVIFMALDLASLTSVQAFATAFLSSEPRLDILIHNAGISSCGR--TR 132

  Fly   173 DGFEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDL-MSEKNYSKFFGAY 236
            :.|.....|||:|.||||:|||.||:..:|||:|:||||||..||::...| .....:.:...||
  Rat   133 ETFNLLLRVNHVGPFLLTHLLLPRLRSCAPSRVVIVSSAAHRRGRLDFTRLDCPVVGWQQELRAY 197

  Fly   237 SQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEI-NRHFSGPGWMKTALQKGSLYFFKTPKA 300
            :.|||||:||..:|:|.|:.||||....|||.|.:|: .||.  |||::..|:..:....:.|:.
  Rat   198 ADSKLANVLFARELATQLEGTGVTCYAAHPGPVNSELFLRHL--PGWLRPILRPLAWLVLRAPQG 260

  Fly   301 GAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPWVRNMQTADWLWRESEKLLGLPPLEPPPPVQSP 365
            ||||.|..||...:|..:|.|:::|....:....|:.|.|..||:.::||.||.|.:.|     .
  Rat   261 GAQTPLYCALQEGIEPLSGRYFANCHVEEVSAAARDDQAAHRLWKVTKKLAGLGPEDDP-----D 320

  Fly   366 TQNGNGTQNGNGSSSASASASSNNPASREMQSVE 399
            |.:....::....||.||.:......|...:|.:
  Rat   321 TDDEQEPRDPRAPSSLSAPSPEKTTISGPSRSYQ 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 122/274 (45%)
Dhrs13NP_001385697.1 retinol-DH_like_SDR_c_like 36..304 CDD:212492 120/271 (44%)

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