DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3842 and DC2.5

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_503155.4 Gene:DC2.5 / 183970 WormBaseID:WBGene00017082 Length:337 Species:Caenorhabditis elegans


Alignment Length:311 Identity:102/311 - (32%)
Similarity:147/311 - (47%) Gaps:52/311 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRDPGR---------CEA--ARLDIMDRSRNQ 125
            :.||...:||..:|:|.||......:||.:.|..|:...         ||.  ||:||:.     
 Worm    43 LSGKTYAITGTTSGVGTETARAFILKGAHIVMINRNYAASETLKQSLLCETPDARIDIVQ----- 102

  Fly   126 QLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFLLT 190
                  .||.||.||:...|.:..::..|..||.||||:......|||.||..||:|||.||||.
 Worm   103 ------CDLSSLASVKKTAEEYLTKKWPLHGLILNAGVLGRKEKTTADRFEAHFGINHLAHFLLI 161

  Fly   191 NLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSE-------KNYSK-FFGAYSQSKLANILFT 247
            ..||..|:.|:|||||::||....|..||.:..:.|       ||.:: ::..|::||:.|:|..
 Worm   162 KELLPVLRSSAPSRIVILSSTLSKFTSINPDSKIEEKLGTLCPKNATEWYYRLYAKSKMCNMLIA 226

  Fly   248 LKLSTILKDTGVTVNCCHPG-VVRTEINRHFSGPGWMKTALQKGSLYFFKTPKAGAQTQLRLALD 311
            .||.....:.|::|...||| .|||  |.|...|.|  :.....|:.|.|....||.|.|..|:.
 Worm   227 FKLHRDEFENGISVYSVHPGSAVRT--NLHRDVPFW--SIFNFLSIPFTKNASQGAATSLYCAVH 287

  Fly   312 PQLEGSTGGYYSDCMRWPLFPW----------VRNMQTADWLWRESEKLLG 352
            |:::..:|.|:..|       |          .|:.:..:.||..||:|:|
 Worm   288 PEVQELSGRYWESC-------WDDELNLDEKVARDEELQEALWEYSEELVG 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 91/266 (34%)
NADB_Rossmann 74..347 CDD:304358 98/302 (32%)
DC2.5NP_503155.4 PRK06196 28..331 CDD:235736 101/309 (33%)
retinol-DH_like_SDR_c_like 45..323 CDD:212492 96/299 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4278
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.690

Return to query results.
Submit another query.