DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and H04M03.3

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_500885.1 Gene:H04M03.3 / 177359 WormBaseID:WBGene00019153 Length:333 Species:Caenorhabditis elegans


Alignment Length:277 Identity:68/277 - (24%)
Similarity:112/277 - (40%) Gaps:63/277 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VIVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARLDIMDRSRNQQLFNRT-----LDLGS 136
            |::||...|||:|..|:||.....:.::.|||.:.:    |::.:.  |..||.|     .||  
 Worm    52 VLITGGTDGIGREAALKLAAEQHEITISGRDPNKAK----DVIGQC--QMKFNNTPRFIQTDL-- 108

  Fly   137 LQSVRNFVERFKAE--ESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFLLTNLLLDRLKH 199
              |:.:.|.:|.::  |.:.||.|.|||||......|.:..|.....|.:..:::.:.::|..:.
 Worm   109 --SLEHEVIKFASQVAEEQFDICILNAGVMNPKPGRTREDREATMMTNLVSSYMIAHKIIDSRRD 171

  Fly   200 S--------SPSRIVVVSSAAHLFGRINREDLMSEKNYS------KFFGAYSQSKLANILFTLKL 250
            .        |.|.:|...:|..|..|....:.:::...|      ...|.|:.||:.  |.|  |
 Worm   172 DQRSLHFVFSTSILVKFHNATPLGIRFFNPEKVTDWQKSLVPTDVSGAGKYAISKIG--LAT--L 232

  Fly   251 STILKD---TGVTVNCCHPGVVRTEINRHF--------------------SGPGWMKTA---LQK 289
            ||.:..   ..:|....|||.|.|.|..:.                    :|...::.|   |..
 Worm   233 STSISQCNLPNITATSVHPGTVYTNIMSNLPARQQFYIKLARPFTTSLADAGANLVRAAENPLPA 297

  Fly   290 GSLYFFKTPKAGAQTQL 306
            |  .|:||.|:....:|
 Worm   298 G--MFYKTDKSSKLPEL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 68/277 (25%)
NADB_Rossmann 74..347 CDD:304358 68/277 (25%)
H04M03.3NP_500885.1 NADB_Rossmann 51..294 CDD:304358 61/255 (24%)
adh_short 52..264 CDD:278532 59/225 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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