DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and Rdh11

DIOPT Version :9

Sequence 1:NP_001259270.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_067532.2 Gene:Rdh11 / 17252 MGIID:102581 Length:316 Species:Mus musculus


Alignment Length:319 Identity:156/319 - (48%)
Similarity:195/319 - (61%) Gaps:17/319 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 FLIVLGILLFMWL----LRKCIQGPAYRKANRIDGKVVIVTGCNTGIGKETVLELAKRGARVYMA 104
            ||::|.:...::|    :||.:.........::.|||.||||.||||||||..:||:||||||:|
Mouse     4 FLLLLSLPFILYLVTPKIRKMLSSGVCTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLA 68

  Fly   105 CRDPGRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRT 169
            |||..:.|.|..:|...:.|.|:|.|.|||...:|:|.|.:.|.|||..|.:||||||||.||.:
Mouse    69 CRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYS 133

  Fly   170 LTADGFEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYSKFFG 234
            .||||||...|||||||||||:|||::||.|:|||||.:||..|..|||:..:|..||.||... 
Mouse   134 KTADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNLQGEKFYSAGL- 197

  Fly   235 AYSQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFFKTPK 299
            ||..|||||||||.:|:..||.:|||....|||.|.:|:.|:.|...|    |.:....|.|||:
Mouse   198 AYCHSKLANILFTKELAKRLKGSGVTTYSVHPGTVHSELTRYSSIMRW----LWQLFFVFIKTPQ 258

  Fly   300 AGAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPWV----RNMQTADWLWRESEKLLGLP 354
            .||||.|..||...||..:|.::|||.    ..||    ||...|..||..|..|||||
Mouse   259 EGAQTSLYCALTEGLESLSGSHFSDCQ----LAWVSYQGRNEIIARRLWDVSCDLLGLP 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_001259270.1 FabG 71..319 CDD:223959 133/247 (54%)
NADB_Rossmann 74..347 CDD:304358 144/276 (52%)
Rdh11NP_067532.2 PRK06197 38..311 CDD:235737 146/281 (52%)
NADB_Rossmann 38..306 CDD:304358 144/276 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 242 1.000 Domainoid score I2214
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.820

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