DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and Hsd17b1

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_034605.1 Gene:Hsd17b1 / 15485 MGIID:105077 Length:344 Species:Mus musculus


Alignment Length:356 Identity:82/356 - (23%)
Similarity:119/356 - (33%) Gaps:109/356 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IDGKVVIVTGCNTGIGKETVLELA---KRGARVYMACRD-----------------PGRCEAARL 116
            :|..||::|||::|||....:.||   .:..:||...||                 ||..|...|
Mouse     1 MDPTVVLITGCSSGIGMHLAVRLASDRSQSFKVYATLRDLKAQGPLLEAARTQGCPPGSLEILEL 65

  Fly   117 DIMDRSRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFG- 180
            |:.|          :..:.:.|:.        ..|.|:|:|:.|||     |.|        || 
Mouse    66 DVRD----------SKSVAAAQAC--------VTEGRVDVLVCNAG-----RGL--------FGP 99

  Fly   181 --------------VNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYSK 231
                          ||.||...:....|..:|.....|::|.:|...|.|             ..
Mouse   100 LEAHELNAVGAVLDVNVLGTIRMLQAFLPDMKRRHSGRVLVTASVGGLMG-------------LP 151

  Fly   232 FFGAYSQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEI-NRHFSGPGWMKTALQKGSLYFF 295
            |...|..||.|.......|:.:|...||.|:....|.|.|.. .:...|||.........:.:.|
Mouse   152 FHEVYCASKFALEGLCESLAILLPLFGVHVSLIECGAVHTAFYEKLVGGPGGALERADAQTRHLF 216

  Fly   296 KTPKAGAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPWVRNMQTADWLWRESEKLLGLPPLEPPP 360
            .....|.:..|..|.||:   .....:...||.|. |.:|...|        .:.|.|..:.   
Mouse   217 AHYLRGYEQALSEAQDPE---EVTELFLTAMRAPQ-PALRYFST--------NRFLPLARMR--- 266

  Fly   361 PVQSPTQNGNGTQNGNGSSSASA---SASSN 388
                       |::.:|||..:|   .|.||
Mouse   267 -----------TEDPSGSSYVAAMHQEAFSN 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 71/308 (23%)
Hsd17b1NP_034605.1 Rossmann-fold NAD(P)(+)-binding proteins 4..260 CDD:473865 71/311 (23%)

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