DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and AT1G55840

DIOPT Version :10

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_175980.1 Gene:AT1G55840 / 842034 AraportID:AT1G55840 Length:325 Species:Arabidopsis thaliana


Alignment Length:256 Identity:53/256 - (20%)
Similarity:100/256 - (39%) Gaps:48/256 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NEKAEDQLMTTRISDLQDWL-QAQPQLPQNISRLLLRRFLHTTRGDLSAAQR-LLE-LNYGLRNK 66
            ||:|..||... :.|:.|.| ::...:.|......|.|||....|::..|.: ||| |.:..:|:
plant     5 NEEAVKQLRAL-MEDVDDSLRESYRNIHQGYPTENLLRFLKARDGNVQKAHKMLLECLEWRTQNE 68

  Fly    67 HAHIFIDR------DPLDASSQQLLQVADLVPLPGLTPENNKLLFYRLIDFDADKFNFTAAIKVF 125
                 ||:      .|:|.  .:.::...||.:.|.:.|...::...:.....||.:....::..
plant    69 -----IDKILTKPIVPVDL--YRGIRDTQLVGVSGYSKEGLPVIAIGVGLSTYDKASVHYYVQSH 126

  Fly   126 FMVADCR------FATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKE 184
            ..:.:.|      .|::.:.|.....:.:.||:|..|..|::..|  :..........:|.:.:.
plant   127 IQMNEYRDRVVLPSASKKQGRPICTCLKILDMSGLKLSALSQIKL--MTAITTIDDLNYPEKTET 189

  Fly   185 IHVLNCPSYVDKVMAVVKPFI---------------KGEVFKLIHFH-LPNADTPYRHFPR 229
            .:|:|.|.........:||.:               |.|:.|::.:. ||       ||.|
plant   190 YYVVNVPYIFSACWKTIKPLLQERTKKKIQVLKGCGKDELLKIMDYESLP-------HFCR 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:469559 29/162 (18%)
AT1G55840NP_175980.1 CRAL_TRIO_N 8..59 CDD:461043 14/51 (27%)
SEC14 91..242 CDD:214706 27/159 (17%)

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