DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and AT1G05370

DIOPT Version :9

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_172029.2 Gene:AT1G05370 / 837038 AraportID:AT1G05370 Length:417 Species:Arabidopsis thaliana


Alignment Length:184 Identity:39/184 - (21%)
Similarity:73/184 - (39%) Gaps:36/184 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SRLLLRRFLHTTRGDLSAAQRLLELNYGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPE 99
            :|..:.|||.....::..|.:.|......|:.   :.|:....|..:.:|.:  .|..:.||..|
plant    41 NRACVGRFLRIKGDNVKKAAKQLRSCLSWRSS---LGIESLIADEFTAELAE--GLAYVAGLDDE 100

  Fly   100 NNKLLFYRLIDFDADKFN----------FTAAIKVFFMVADCRFATENEERLSDGEIPVFDMAGY 154
            ...:|.:| |..|..|.:          ||..:.:..|       :.|.|:.    :.:||.:.:
plant   101 CRPVLVFR-IKQDYQKLHTQKQLTRLVVFTLEVAISTM-------SRNVEQF----VILFDASFF 153

  Fly   155 TLRHLTKTA---LGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKVMAVVKPFI 205
                  |:|   :..|...:|.|.|.:|.||.:..|::.||....:...::.|:
plant   154 ------KSASAFMNILVTTLKIVAEYYPCRLFKTFVIDPPSLFSYLWKGIRTFV 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:238099 29/129 (22%)
AT1G05370NP_172029.2 SEC14 89..219 CDD:238099 29/133 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1053004at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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