DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and SFH12

DIOPT Version :10

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_568006.1 Gene:SFH12 / 829801 AraportID:AT4G36490 Length:543 Species:Arabidopsis thaliana


Alignment Length:241 Identity:53/241 - (21%)
Similarity:87/241 - (36%) Gaps:56/241 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NYGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPENNKLLFYRLIDFDADKFN--FTAAI 122
            ::|:..:...::|:|..| ..|.:|:||..:          ::.:.|.:::|:. .||  |.|  
plant   132 HHGVDKEGRPVYIERLGL-VDSTKLMQVTTM----------DRYVNYHVMEFER-TFNVKFPA-- 182

  Fly   123 KVFFMVADCRFATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHV 187
                    |..|.:..   .|....:.|:.|..|::..|.|...:....|...:.:|..|..:.:
plant   183 --------CSIAAKKH---IDQSTTILDVQGVGLKNFNKAARDLITRLQKVDGDNYPETLNRMFI 236

  Fly   188 LNCPSYVDKVMAVVKPFIKGEVFKLIHFHLPNADTPYRH-----FPRSMLPEEYGG------EAG 241
            :|..|....:...||.|:..:....||. |.|   .|:.     ...|.|||..||      ..|
plant   237 INAGSGFRMLWNTVKSFLDPKTTAKIHV-LGN---KYQSKLLEIIDESELPEFLGGSCTCADNGG 297

  Fly   242 KMSDLKLQWMQLLKEQRDYLMDTENWQINKIKKNGQRKSSDSGVTE 287
            .|...|..|              :|.:|.|...||..|.|.....|
plant   298 CMRSDKGPW--------------KNPEIMKRVHNGDHKCSKGSQAE 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:469559 33/161 (20%)
SFH12NP_568006.1 CRAL_TRIO_N 54..100 CDD:215024
SEC14 120..290 CDD:214706 41/186 (22%)
Blue background indicates that the domain is not in the aligned region.

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