DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and COW1

DIOPT Version :10

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_195184.2 Gene:COW1 / 829610 AraportID:AT4G34580 Length:554 Species:Arabidopsis thaliana


Alignment Length:324 Identity:68/324 - (20%)
Similarity:115/324 - (35%) Gaps:83/324 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DQLMTTRISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDLSAAQRL-LELNYGLRNKHAHIFID 73
            |:|:.:::.||.                ::.|||...:.|:..|::: .::....::..|...|:
plant    76 DELLPSKLDDLH----------------MMLRFLRARKFDIEKAKQMWSDMIQWRKDFGADTIIE 124

  Fly    74 RDPLDASSQQLLQVADLVP--LPGLTPENNKLLFYRLIDFDADKF---------------NFTAA 121
                |...:::.:|....|  ..|:..|...:...||...||:|.               .|...
plant   125 ----DFDFEEIDEVMKHYPQGYHGVDKEGRPVYIERLGQIDANKLLQVTTMDRYVKYHVKEFEKT 185

  Fly   122 IKVFFMVADCRFATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIH 186
            .||.|  ..|..|....   .|....:.|:.|..|::.:|:|...|:...|...|.:|..|..:.
plant   186 FKVKF--PSCSVAANKH---IDQSTTILDVQGVGLKNFSKSARELLQRLCKIDNENYPETLNRMF 245

  Fly   187 VLNCPSYVDKVMAVVKPFIKGEVFKLIH-----FHLPNADTPYRHFPRSMLPEEYGG------EA 240
            ::|..|....:.:.||.|:..:....||     :|....:.    ...|.|||.:||      :.
plant   246 IINAGSGFRLLWSTVKSFLDPKTTAKIHVLGNKYHSKLLEV----IDASELPEFFGGACTCEDKG 306

  Fly   241 GKMSDLKLQWMQLLKEQRDYLMDTENWQINKIKKNGQRKSS----------DSG-VTEGLRSLE 293
            |.|...|..|              .:.::.||..|.:.|.|          |.| .|.|..|||
plant   307 GCMRSDKGPW--------------NDPEVLKIAINREAKCSPISEDEHKHVDQGRSTSGFESLE 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:469559 39/176 (22%)
COW1NP_195184.2 CRAL_TRIO_N 64..107 CDD:215024 9/46 (20%)
SEC14 133..298 CDD:214706 38/173 (22%)

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