DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and rlbp1

DIOPT Version :9

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:258 Identity:52/258 - (20%)
Similarity:114/258 - (44%) Gaps:29/258 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EKAEDQLMTTR------ISDLQDWLQAQPQLPQNISRLL-----------LRRFLHTTRGDLSAA 53
            :||:|:|..|.      :.:|:..:|.:....:.:.:.:           ..||:...:.|:|.|
 Frog    46 QKAKDELNETEEKRESAVKELRALVQEKANAGEELCKAVADKVKDKGDDFFLRFIRARKFDVSRA 110

  Fly    54 QRLLELNYGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPENNK----LLFYRLIDFDAD 114
            ..||:.....|.::..:|.|..|      :.::.......||:....:|    :|.:.:..:|.:
 Frog   111 YELLKGYVNFRQQYPELFEDLTP------EAVRSTIEAGYPGILTSRDKNGRVILLFNIESWDYE 169

  Fly   115 KFNFTAAIKVFFMVADCRFATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQEAHP 179
            :..|...::.:.::.:.  ..||||...:|...:.:..|:|::..:......|:..:..:|::.|
 Frog   170 EITFDEILRAYCIILES--LLENEETQINGFCIIENFKGFTMQQASGIKPSELKKMVDMLQDSFP 232

  Fly   180 VRLKEIHVLNCPSYVDKVMAVVKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGGEAGK 242
            .|.|.:|.::.|.|......|||||:|.::.:.:..|..:.:..|:.....:||.::||...|
 Frog   233 ARFKAVHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLEGFYKEIDADILPADFGGNLPK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:238099 32/152 (21%)
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 9/56 (16%)
CRAL_TRIO 143..292 CDD:306996 32/150 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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