DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and pinta

DIOPT Version :10

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_651042.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster


Alignment Length:292 Identity:68/292 - (23%)
Similarity:126/292 - (43%) Gaps:46/292 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NEKAEDQLMTT---------RISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDLSAAQRLLELN 60
            :..::.|:.||         ::.||.|||.|.||:....:...|..||.|::.|:..|::.|:..
  Fly     5 SSSSKRQVATTDGDPERVLAQVQDLSDWLVANPQINGCNTFENLHFFLRTSKFDVERAKKKLKTF 69

  Fly    61 YGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPENNKLLFYRLIDFDADKFNFTAAIKVF 125
            |.:|.:....|.:|||.....|.||::...:|: |...|...::..|....|....:.....|..
  Fly    70 YQMRAERTEWFDNRDPQLPEIQDLLKLGVFLPI-GPDAEQRMVVVIRTAAHDPKLHSQNNVFKTS 133

  Fly   126 FMVADCRFATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQE------AHPVRLKE 184
            .|:.|.....: .|..:.|.:.:.||.|..|.|       ||::..|.::.      |:|.:.|.
  Fly   134 KMILDLLLKLD-PETCARGMVAILDMQGVQLGH-------ALQMNPKLIKRSVESWTAYPCQPKL 190

  Fly   185 IHVLNCPSYVDKVMAVVKPFIKGEVFKLIHFHLPNADTPYRHFPR--------SMLPEEYGGEAG 241
            :...|.|.:|:..:...:.|:..::..             |.|.|        ..||:|.||:..
  Fly   191 LEFTNAPRHVNFFLNTFRIFMTPKIRS-------------RLFVRREGTSVSCDQLPKELGGQGL 242

  Fly   242 KMSDLKLQWMQLLKEQRDYLMDTENWQINKIK 273
            ...:|.::|.||::|..|:.::.:.:: :|:|
  Fly   243 SYMELSVKWKQLVEENADFYVEQDKYK-SKLK 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:469559 32/162 (20%)
pintaNP_651042.1 SEC14 87..239 CDD:469559 34/173 (20%)

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