DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and rlbp1a

DIOPT Version :9

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:274 Identity:58/274 - (21%)
Similarity:124/274 - (45%) Gaps:39/274 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HLNEKAEDQLMTT------RISDLQDWLQAQPQLPQNISRL-----------LLRRFLHTTRGDL 50
            |..:||:|:|..|      .|.:|:..::.:......:::.           ||.||:...:.|:
Zfish    42 HTKQKAKDELNETDEKRASAIKELRAMIKDKAGQGDEVAKTVQDKFGKEPDSLLLRFIRARKFDV 106

  Fly    51 SAAQRLLELNYGLRNKHAHIFID------RDPLDASSQQLLQVADLVPLPGLTPENNK-LLFYRL 108
            :.|..|::.....|..:..:|.:      |..::|...::|...|         :|.: :|.:.:
Zfish   107 ARAHELMKGYVRFRRDYPELFENLTPEAVRSTIEAGYPRILSTRD---------KNGRVVLLFNI 162

  Fly   109 IDFDADKFNFTAAIKVFFMVADCRFATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKF 173
            .::|.::..|...::.:.::.:  ...||||...:|.:.:.:..|:|::|.:......|:..:..
Zfish   163 DNWDLEEVTFDETLRAYCVILE--KLLENEETQINGFVLIENFKGFTMQHASGIKHTELKKMVDM 225

  Fly   174 VQEAHPVRLKEIHVLNCPSYVDKVMAVVKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGG 238
            :|::.|.|.|.:||::.|.|......|||||:|.::.:.:..|....|...|.|...:||.::.|
Zfish   226 LQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKSKLLERVFVHGDELDGYLRDFGAEILPPDFDG 290

  Fly   239 EA----GKMSDLKL 248
            ..    |:.:.:||
Zfish   291 TGPACDGRETAIKL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:238099 33/149 (22%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 9/56 (16%)
CRAL_TRIO 142..291 CDD:279044 35/159 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579387
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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