DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and Clvs1

DIOPT Version :9

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:281 Identity:59/281 - (20%)
Similarity:120/281 - (42%) Gaps:32/281 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VHLNEKAEDQLMTTRISDLQDWLQAQPQLP-QNISRLLLRRFLHTTRGDLSAAQRLLELNYGLRN 65
            :.|||..:  ::...|..::|.:..:|.:. .......:.|||...:...:.|.|||...:..|.
  Rat    40 LELNENPD--VLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQYRQ 102

  Fly    66 KHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPEN-----NKLLFYRLIDFDADKFNFTAAIKVF 125
            .:..:|.:....|...::.|    :...||:. ||     .|:|.....::|..:.:||..::..
  Rat   103 LNLDMFKNFKADDPGIKRAL----IDGFPGVL-ENRDHYGRKILLLFAANWDQSRNSFTDILRAI 162

  Fly   126 FMVADCRFATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHVLNC 190
            .:  ......|:.|...:|.|.:.|.:.::.:..:|.....|::.::.:|::.|.|...:|.:|.
  Rat   163 LL--SLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQ 225

  Fly   191 PSYVDKVMAVVKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGG-----EAGKMSDLKLQW 250
            |.|:..:..::|||:|.:..|.|..|..|.::.::......||.|:||     :.|       .|
  Rat   226 PWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGGTLPPYDMG-------TW 283

  Fly   251 MQLL-----KEQRDYLMDTEN 266
            .:.|     .::.||...:.|
  Rat   284 ARTLLGPDYSDENDYTHTSYN 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:238099 36/158 (23%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 10/45 (22%)
CRAL_TRIO 125..274 CDD:395525 35/151 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339600
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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