DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and Ttpal

DIOPT Version :9

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001100007.1 Gene:Ttpal / 296349 RGDID:1305754 Length:343 Species:Rattus norvegicus


Alignment Length:302 Identity:71/302 - (23%)
Similarity:131/302 - (43%) Gaps:39/302 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LNEKAEDQLMTTRISDLQDWLQAQ-PQLPQNISRLLLRRFLHTTRGDLSAAQRLLELNYGLRNKH 67
            |.||.|.:|..  :..|:|.::.: |.|..::....|.|||...:.|...|.:||...:|.|...
  Rat    48 LQEKPEWRLRD--VQALRDMVRKEYPYLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHGCRRSW 110

  Fly    68 AHIFIDRDPLDASSQQLLQVADLVPLPGLTPENNKLLFYRLIDFDADKFNFTAAIKVFFMVADCR 132
            ..:|.:..|  ::.:.:|....|..||...|....:|..|...:....:..|..|:..::..:  
  Rat   111 PEVFSNLRP--SALKDVLNSGFLTVLPHTDPRGCHVLCIRPDRWIPSNYPITENIRAIYLTLE-- 171

  Fly   133 FATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKV 197
            ...::||...:|.:.:.|..|.:|...:.......|..:..:|:..|:|:|.:|::|.|.....:
  Rat   172 KLIQSEETQVNGVVILADYKGVSLSKASHFGPFIARKVIGILQDGFPIRIKAVHIVNEPRIFKGI 236

  Fly   198 MAVVKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQWMQLLKEQRDYLM 262
            .|::|||:|.::......|..:..:.:...||::||:||||.||:                   :
  Rat   237 FAIIKPFLKEKIANRFFLHGSDLSSLHTSLPRNILPKEYGGTAGE-------------------L 282

  Fly   263 DTENW-------QINKIKKNGQRKSSDSG------VTEGLRS 291
            ||.:|       :.:.:|:..|.:|...|      :.|||.|
  Rat   283 DTASWNAVLLASEDDFVKEFCQPESGCDGLLGQPLLPEGLIS 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:238099 35/148 (24%)
TtpalNP_001100007.1 CRAL_TRIO_N 57..103 CDD:215024 12/47 (26%)
SEC14 122..278 CDD:238099 36/157 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10174
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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