DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and spo20

DIOPT Version :10

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_593003.1 Gene:spo20 / 2543628 PomBaseID:SPAC3H8.10 Length:286 Species:Schizosaccharomyces pombe


Alignment Length:278 Identity:53/278 - (19%)
Similarity:105/278 - (37%) Gaps:46/278 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HLNEKAEDQLMTTRISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDLSAAQRLLEL-------- 59
            |||...:..|.:.|: :||     :....:.:....|.|||...:.:|   |:.||:        
pombe    23 HLNSTQQATLDSMRL-ELQ-----KLGYTERLDDATLLRFLRARKFNL---QQSLEMFIKCEKWR 78

  Fly    60 -NYG----LRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPENNKLLFYRLIDFDADKFNFT 119
             .:|    ::|.|   :.:::.:.....|.....|:...|....:...:...:|......:....
pombe    79 KEFGVDDLIKNFH---YDEKEAVSKYYPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQ 140

  Fly   120 AAIKVFFMVADCRF--ATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMK----FVQEAH 178
            ..:..:.|:|..||  .:.....|.:....:.|:.|..:     |::.::..|::    ..|:.:
pombe   141 NLVYEYEMLALKRFPACSRKAGGLIETSCTIMDLKGVGI-----TSIHSVYSYIRQASSISQDYY 200

  Fly   179 PVRLKEIHVLNCPSYVDKVMAVVKPFIKGEVFKLIHFHLPNADTP-YRHFPRSMLPEEYGGEAG- 241
            |.|:.:.:|:|.|........::|.|:.....|.||....|..:. ....|...||.:.||... 
pombe   201 PERMGKFYVINAPWGFSSAFNLIKGFLDEATVKKIHILGSNYKSALLEQIPADNLPAKLGGNCQC 265

  Fly   242 ----KMSDL----KLQWM 251
                ::||.    :.|||
pombe   266 PGGCELSDAGPWHEEQWM 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:469559 27/155 (17%)
spo20NP_593003.1 CRAL_TRIO_N 29..74 CDD:215024 12/53 (23%)
SEC14 94..264 CDD:214706 30/174 (17%)

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