DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3823 and clvs1

DIOPT Version :9

Sequence 1:NP_572313.1 Gene:CG3823 / 31573 FlyBaseID:FBgn0029863 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_012819596.1 Gene:clvs1 / 100037913 XenbaseID:XB-GENE-5740434 Length:332 Species:Xenopus tropicalis


Alignment Length:243 Identity:53/243 - (21%)
Similarity:108/243 - (44%) Gaps:15/243 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VHLNEKAEDQLMTTRISDLQDWLQAQPQLP-QNISRLLLRRFLHTTRGDLSAAQRLLELNYGLRN 65
            :.|||..:  .:...|..::|.:..:|.:. .......:.|||...:.:...|.|||...:..|.
 Frog    18 LELNENPD--TLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFNQMEAFRLLAQYFQYRQ 80

  Fly    66 KHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPEN-----NKLLFYRLIDFDADKFNFTAAIKVF 125
            .:..:|.:....|...::.|    :...||:. ||     .|:|.....::|..:.:|...::..
 Frog    81 LNLDMFKNLKADDPGIKRAL----MDGFPGVL-ENRDHYGRKILLLFAANWDQSRNSFVDILRAI 140

  Fly   126 FMVADCRFATENEERLSDGEIPVFDMAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHVLNC 190
            .:  ......|::|...:|.|.:.|.:.::.:..:|.....||:.::.:|::.|.|...:|.:|.
 Frog   141 LL--SLEVLIEDQELQINGFILIIDWSNFSFKQASKLTPSILRLAIEGLQDSFPARFGGVHFVNQ 203

  Fly   191 PSYVDKVMAVVKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGG 238
            |.|:..:..::|||:|.:..|.|..|..|.::.::......||.|:||
 Frog   204 PWYIHALYTIIKPFLKDKTRKRIFLHGNNLNSLHQLIHPDCLPSEFGG 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3823NP_572313.1 SEC14 90..239 CDD:238099 36/154 (23%)
clvs1XP_012819596.1 CRAL_TRIO_N 29..75 CDD:215024 10/45 (22%)
SEC14 106..252 CDD:238099 35/149 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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