DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12219 and LOC4576335

DIOPT Version :10

Sequence 1:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_001237671.3 Gene:LOC4576335 / 4576335 VectorBaseID:AGAMI1_003412 Length:548 Species:Anopheles gambiae


Alignment Length:625 Identity:125/625 - (20%)
Similarity:202/625 - (32%) Gaps:160/625 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CRLCLNALDEQSAVLLFDGAGGASAPAPDDEDDGKAMPESYLVQLISIHLYLCLSRDDAISTCIC 67
            |||||..|:.|           .|....::|...:.:...:...:.||         :|..:.:|
Mosquito     5 CRLCLARLENQ-----------RSNATIEEEGFREKLKTLFSFPITSI---------EAFPSTVC 49

  Fly    68 TECCSQLESFHNFWKLVELKQTTLCSQFLAIDCDVNWSEDG----SETQLDAQP-------QLLL 121
            .:|.:::..||.:.:.|:..|..|            ||...    .|.:::..|       :|..
Mosquito    50 VQCEARVSDFHTYHEQVKSNQDQL------------WSTQHQKYFEEVKVEPAPDADYDVFELPF 102

  Fly   122 EPAEEPKVVTPTTANKFPCMFCEKSFKMRRYLEEHIATHTGD-RPIACPYCEMAFRCRSNMYT-- 183
            |.||..:.....:....|...|::. ::::..|:.|.:...| ..:...|...:....||..:  
Mosquito   103 EEAEPVEGAPKESCKNEPDSKCQQQ-QLQQLDEQTIDSDLDDGMKLEDEYNPPSSSAASNNNSDD 166

  Fly   184 ---HVKSKHTTQWLKAREERDAAKSNQNHTTPEETAPAVLVPVPAPAPALASAPASSASPGNTVN 245
               .||.:        |.:|....:::..||.....|              .:.|.:.|||....
Mosquito   167 SEYEVKPR--------RSKRVTDTADRTRTTRRGRPP--------------KSEAGTRSPGEQKK 209

  Fly   246 PAATATPASSATPTTNLAAAPLPSPPTVQQL-PLSVIKSQPSEAMNLTIT----------KTPPS 299
            .:........||..||            |:| ....:|.:..|....:.|          :||..
Mosquito   210 KSPIVVRRCQATNETN------------QKLREFYDMKCEMCEEQLESFTALKNHYYRTHRTPGY 262

  Fly   300 GSRGSRNRSSR---------------------RKTHSPKK--VQHTEGSDVSDEDSPQK------ 335
            .....|...||                     .||.|.:.  :.|........||.|.|      
Mosquito   263 IKCCGRTFHSRYRLLEHLSYHVGSSMVRCEECNKTFSSRSYLLVHRSRVHGQAEDRPYKCTQCHQ 327

  Fly   336 ------RLKENEL--ILANYNAVAAAVVAAASLTGNPPGQPDSLQQRLCASLLQQQHQEQLFAVM 392
                  .||.:.:  :..|.......:.:|.||..:......:.:..:|.|..::....|.|   
Mosquito   328 SYAMECHLKAHIVSHVRVNCTICGKELASALSLRTHMINMHGNRENHICDSCGREFRSRQAF--- 389

  Fly   393 SATAAAAAAVGTSSATTTTTTTTGTMMAHPYGNHPPSETDKRPAAPLQAVIHAAP--------VS 449
              .......:|...|......     :.|.:.|      .||.......::|...        .|
Mosquito   390 --ERHVKLHLGLEVAEQVQCE-----VCHKWLN------SKRALKMHVKLVHMEAGQTFQCDICS 441

  Fly   450 IICPNCGELPGQNHRCLSKPKYACDVCGKSFKMKRYLEEHFAT-HTGVKLHTCAFCPTEFRSKSN 513
            ..|||...|.....|...:.::.|:.|||.||.:.||:||.|. ||...|::|..|...|.|.:|
Mosquito   442 QQCPNSRALANHKQRVHVEERFKCEECGKLFKRQLYLKEHVAALHTRKPLYSCEVCGATFNSNAN 506

  Fly   514 MYHHTKRKHKAEWERSRATRSAAKAGVQEQMQHTNPSQAQ 553
            .|.|.|.||..|||..|..:...:   |||.||....|.:
Mosquito   507 KYSHRKNKHPVEWEERRKQQLQQQ---QEQQQHHQQQQQE 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12219NP_572312.1 zf-AD 2..91 CDD:214871 18/87 (21%)
PHA00733 <117..189 CDD:177301 15/84 (18%)
C2H2 Zn finger 140..160 CDD:275368 3/19 (16%)
zf-H2C2_2 152..177 CDD:463886 4/25 (16%)
C2H2 Zn finger 168..186 CDD:275368 3/22 (14%)
C2H2 Zn finger 473..493 CDD:275370 11/20 (55%)
C2H2 Zn finger 501..522 CDD:275370 8/20 (40%)
LOC4576335XP_001237671.3 None

Return to query results.
Submit another query.