DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12219 and CG4707

DIOPT Version :10

Sequence 1:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster


Alignment Length:600 Identity:108/600 - (18%)
Similarity:162/600 - (27%) Gaps:274/600 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SAPAPD---DEDDGK-----------AMPESYLVQLISIHLYLCLSRDDAISTCICTECCSQLES 76
            |||:|.   |.:||:           ..||:            .|..||:.|        |..||
  Fly   217 SAPSPKKELDSEDGEENARDNNDMEFVAPEA------------VLGTDDSSS--------SSSES 261

  Fly    77 FHNFWKLVELKQTTLCSQFLAIDCDVNWSEDGSETQLDAQPQ---------LLLEPAE----EPK 128
            .                           .||...:..|.:|:         ::::|.:    |..
  Fly   262 S---------------------------GEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKP 299

  Fly   129 VVTPTTAN-----------------------KFPCMFCE-------------------------- 144
            :|.|...:                       ||||..|.                          
  Fly   300 LVPPVRLSREEIERRKLQQDEYDEIILQFFKKFPCSLCNLLVQNFADMRRHQRVSHNIESGYIEC 364

  Fly   145 --KSFKMRRYLEEHIATHTGDRPIACPYCEMAFRCRSNMYTHVKSKHTTQWLKAREERDAAKSNQ 207
              :.|.:|:.|.||:..|.......|..|...|:....:..|                     .|
  Fly   365 CGRKFHLRKALAEHVLVHKNPDHFMCSQCGRVFQDSRALEVH---------------------EQ 408

  Fly   208 NHTTPEETAPAVLVPVPAPAPALASAPASSASPGNTVNPAATATPASSATPTTNLAAAPLPSPPT 272
            .||.||                                                           
  Fly   409 THTNPE----------------------------------------------------------- 414

  Fly   273 VQQLPLSVIKSQPSEAMNLTITKTPPSGSRGSRNRSSRRKTHSPKKVQHTEGSDVSDEDSPQKRL 337
                    :|::|.|.......|.|.|.:..:.........|.||........:.:.:...:::|
  Fly   415 --------VKAEPKEKRIYQCEKCPKSFTTKAAMEYHDVSKHVPKSEFKYSCPECNKKIPTERKL 471

  Fly   338 KENELILANYNAVAAAVV------AAASLTG-----------NPPGQPDSLQQRLCASLLQQQHQ 385
            ||:   |...:...||::      ...|.|.           .|..:||.:|..:|.:.|  :|.
  Fly   472 KEH---LRYMHDPEAAIICDKCGKTLRSQTNLKKHHELEHSEKPRPKPDPVQCEICGTWL--RHL 531

  Fly   386 EQLFAVMSATAAAAAAVGTSSATTTTTTTTGTMMAHPYGNHPPSETDKRPAAPLQAVIHAAPVSI 450
            ..|...|..................|:|.:..:..|.|.||                        
  Fly   532 SGLKQHMKTVHEPPGDEHRCHICNKTSTNSRALKRHIYHNH------------------------ 572

  Fly   451 ICPNCGELPGQNHRCLSKPKYACDVCGKSFKMKRYLEEHFATHTGVKLHTCAFCPTEFRSKSNMY 515
                           |.:.|:.|.:|.|:||..:.|.||.:||||..|:||..||..|.|.:|||
  Fly   573 ---------------LCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMY 622

  Fly   516 HHTKRKHKAEWERSR 530
            .|.:|.|:||||..|
  Fly   623 KHRQRLHRAEWEADR 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12219NP_572312.1 zf-AD 2..91 CDD:214871 16/78 (21%)
PHA00733 <117..189 CDD:177301 20/135 (15%)
C2H2 Zn finger 140..160 CDD:275368 7/47 (15%)
zf-H2C2_2 152..177 CDD:463886 7/24 (29%)
C2H2 Zn finger 168..186 CDD:275368 4/17 (24%)
C2H2 Zn finger 473..493 CDD:275370 8/19 (42%)
C2H2 Zn finger 501..522 CDD:275370 10/20 (50%)
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 2/20 (10%)
LIM <361..407 CDD:413332 10/66 (15%)
C2H2 Zn finger 365..382 CDD:275368 5/16 (31%)
C2H2 Zn finger 390..410 CDD:275368 5/40 (13%)
C2H2 Zn finger 427..443 CDD:275368 3/15 (20%)
COG5236 <455..>574 CDD:227561 23/162 (14%)
C2H2 Zn finger 458..476 CDD:275368 3/20 (15%)
C2H2 Zn finger 487..507 CDD:275368 2/19 (11%)
C2H2 Zn finger 521..540 CDD:275368 5/20 (25%)
C2H2 Zn finger 551..572 CDD:275368 4/20 (20%)
C2H2 Zn finger 580..600 CDD:275368 8/19 (42%)
C2H2 Zn finger 608..629 CDD:275368 10/20 (50%)
Blue background indicates that the domain is not in the aligned region.

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