DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12219 and CG30020

DIOPT Version :10

Sequence 1:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:478 Identity:92/478 - (19%)
Similarity:153/478 - (32%) Gaps:124/478 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 CMFCEKSFKMRRYLEEHIATHTGDRPIACPYCEMAFRCRSNMYTHVKSKHTTQWLKAREERDAAK 204
            |::|.|.|..:...|.|:..|.|..|..|..|...:..:..:..|.|:.|     |....||..:
  Fly   730 CIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVH-----KRMPTRDMVQ 789

  Fly   205 SNQNHTTPEETAPAVLVP--VPAPAPALASAPASSASPG---------NTVNPAATATPASSATP 258
            :..:..:...|....|.|  :..|....|..|....|..         :.:|...    :..|..
  Fly   790 AKGDKVSVARTNIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGINDGV----SEHANE 850

  Fly   259 TTNLAAAPLPSPPTVQQLPLSVIKSQPSEAMNLTIT----KTPPSGSRGSRNRSSRRKTHS-PKK 318
            ...:...|...|..::........|:..:..:|..|    :||..|...:...::...|.| |..
  Fly   851 VFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISEPVN 915

  Fly   319 VQHTEGSDVSDEDSPQKRLKENELILANYNAVAAAVVAAASLT-------GNPPG---------- 366
            ....:|             :.||::..:        |.|..:|       ||..|          
  Fly   916 SVTVDG-------------QHNEMMQTD--------VGAEKMTEALGNGDGNEEGGTDDGTGVKA 959

  Fly   367 QPDSLQQRLCASLLQQQHQEQLFAVMSATAAAAAAVGTS--SATTTTTTTTGTMMAHP------- 422
            :|...::.|....|.........|:.:|.:|||||..||  |...||.:::.|:...|       
  Fly   960 EPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDY 1024

  Fly   423 -------------------------YGNHPPSETDK---------RPAAPLQ--AVIHAAPVSII 451
                                     ..:.|.:|:.|         .||..|:  :.:|.:.:. |
  Fly  1025 DIMRDEAQQSSPNIHDVSKALSDNASSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIH-I 1088

  Fly   452 CPNCG--------------ELPGQNHRCLSKPKYACDVCGKSFKMKRYLEEHFATHTGVKLHTCA 502
            |..|.              ||.....|.....::.|.:|..|::....|:.|...|:..| ..|.
  Fly  1089 CKLCNQTFDELGKLVKHEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRK-SQCK 1152

  Fly   503 FCPTEFRSKSNMYHHTKRKHKAE 525
            .||..|.:.:.:..|||.||..:
  Fly  1153 LCPKSFVTIAELERHTKAKHSKD 1175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12219NP_572312.1 zf-AD 2..91 CDD:214871
PHA00733 <117..189 CDD:177301 13/48 (27%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
zf-H2C2_2 152..177 CDD:463886 7/24 (29%)
C2H2 Zn finger 168..186 CDD:275368 3/17 (18%)
C2H2 Zn finger 473..493 CDD:275370 5/19 (26%)
C2H2 Zn finger 501..522 CDD:275370 7/20 (35%)
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368 6/19 (32%)
C2H2 Zn finger 758..777 CDD:275368 3/18 (17%)
C2H2 Zn finger 1089..1110 CDD:275368 3/20 (15%)
C2H2 Zn finger 1124..1144 CDD:275368 5/19 (26%)
C2H2 Zn finger 1151..1172 CDD:275368 7/20 (35%)
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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