DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12219 and znf462

DIOPT Version :10

Sequence 1:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_002934034.2 Gene:znf462 / 100492944 XenbaseID:XB-GENE-976911 Length:2458 Species:Xenopus tropicalis


Alignment Length:536 Identity:98/536 - (18%)
Similarity:162/536 - (30%) Gaps:149/536 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RDDAISTCICTEC----------CSQLESFHNFWKLVELKQTTLCSQFLAIDCD-VNWS-EDGSE 110
            ::.|:....|..|          |:.|.....:..:.||.......::...|.| :.:. :||.:
 Frog  1861 KEKAVVGYKCKFCVEVHPTLRAICNHLRKHVQYGNVPELSSDLQDEKYEFTDEDTIEYDYDDGVD 1925

  Fly   111 TQLDAQPQLLLEPAEEPKVVTPTTANK--------FPCMFCEKSFKMRRYLEEHIATH------T 161
            .:.:...:....||||..|.......|        :||..|::.....:.|..|..:|      |
 Frog  1926 DEEEEDVEEASTPAEENPVDEAKETKKGRRTRPGGYPCKQCDRVLMSMQGLRSHERSHLALAMFT 1990

  Fly   162 GDRPIACPYCEMAFRCRSNMYTHVKSKHTTQWLKAREERDAAKSNQNHTTPEETAPAVLVPVPAP 226
            .|...:|.:|......|.|:..||::.|                  .|..|..   ..|.|..:.
 Frog  1991 RDDKYSCQFCSFVSAFRHNLDRHVQTHH------------------GHHKPFR---CKLCPFKSS 2034

  Fly   227 APALASAPASSASPGNTVNPAATATPASSATPTTNLAAAPLPSPPTVQQLPLSVIKSQPSEAMNL 291
            ..:........|..|......       |..|.:.:         |:.||....:|.. .:.:.|
 Frog  2035 YNSRLKTHIMKAHAGEHAYKC-------SFCPFSTM---------TISQLKDHSLKVH-GKTLTL 2082

  Fly   292 ----TITKTPPSGSRGSRNRSSRRKTHSPKKVQHTEGSDVSDEDSP---QKRLKE-NELILANYN 348
                ||::|.|...:.:|             :....|.|.|....|   |::|.. ....||.||
 Frog  2083 PRIRTISQTSPRAKQTTR-------------IGKESGLDDSSYSEPPDVQQQLNHYQSAALARYN 2134

  Fly   349 AVAAAVVAAASLTGNPPGQPDSLQQRLC---ASLLQ--QQHQ------EQLFAVMSATAAAAAAV 402
            ..:.|.:..:| |.....|...|....|   :..:|  ::|.      ::||.....        
 Frog  2135 NNSPAPLPVSS-TSAEQNQEAVLNCEFCDFSSGYIQSIRRHYRDKHGGKKLFKCKDC-------- 2190

  Fly   403 GTSSATTTTTTTTGTMMAHPYGNHPPSETDKRPAAPLQAVIHAAPVSIICPNCGELPGQNHR--- 464
                :..|...:..||  |....|        .|.|::     .|..:.||.|.......|.   
 Frog  2191 ----SFYTCFKSAFTM--HVEAGH--------SATPME-----GPKDLRCPLCLYHTKYKHNMID 2236

  Fly   465 ---------------CLSKPK-------YACDVCGKSFKMKRYLEEHFATHTGVKLHTCAFCPTE 507
                           |.||..       :.||.|..:......|::|...|..:|.:.|..|..|
 Frog  2237 HIVLHREERVVPIEVCRSKLSKHLQGVVFRCDKCTFTCSSDEALQQHIEKHNELKPYKCQLCYYE 2301

  Fly   508 FRSKSNMYHHTKRKHK 523
            .:....:..|.:.:||
 Frog  2302 TKLSEELDTHLREEHK 2317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12219NP_572312.1 zf-AD 2..91 CDD:214871 7/42 (17%)
PHA00733 <117..189 CDD:177301 20/85 (24%)
C2H2 Zn finger 140..160 CDD:275368 4/19 (21%)
zf-H2C2_2 152..177 CDD:463886 7/30 (23%)
C2H2 Zn finger 168..186 CDD:275368 5/17 (29%)
C2H2 Zn finger 473..493 CDD:275370 5/19 (26%)
C2H2 Zn finger 501..522 CDD:275370 4/20 (20%)
znf462XP_002934034.2 C2H2 Zn finger 1963..1983 CDD:275370 4/19 (21%)
C2H2 Zn finger 1997..2017 CDD:275368 6/19 (32%)
C2H2 Zn finger 2026..2047 CDD:275368 2/20 (10%)
C2H2 Zn finger 2055..2076 CDD:275368 6/36 (17%)
C2H2 Zn finger 2221..2241 CDD:275368 4/19 (21%)
C2H2 Zn finger 2267..2287 CDD:275368 5/19 (26%)

Return to query results.
Submit another query.