DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12219 and LOC100365363

DIOPT Version :9

Sequence 1:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_006228060.2 Gene:LOC100365363 / 100365363 RGDID:2319215 Length:670 Species:Rattus norvegicus


Alignment Length:506 Identity:106/506 - (20%)
Similarity:159/506 - (31%) Gaps:137/506 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 CTECCSQLESFHNFWKLVELKQTTLCSQFLAIDCDVNWSEDGSETQLDAQPQLLLEPAEEPKVVT 131
            |.||....  |...:.||..:..:....:...:|...:|::   :.|.:..:  :...|:|    
  Rat   176 CVECGKAF--FRRSYLLVHERHHSGAKPYKCNECGKVFSQN---SHLKSHRR--IHTGEKP---- 229

  Fly   132 PTTANKFPCMFCEKSFKMRRYLEEHIATHTGDRPIACPYCEMAFRCRSNMYTHVKSKHTTQWLKA 196
                  :.|..|.|:|.:|..|..|:..||||:|..|..|...|...|::..|.::....:..:.
  Rat   230 ------YKCNDCGKAFSVRSNLTHHLVIHTGDKPYKCNECGKVFSQTSSLTIHRRTHTGEKPYRC 288

  Fly   197 REERDAAKSNQNHTTPEETAPAVLVPVPAPAPALASAPASSASPGNT------------------ 243
            .|......|:.|..|.:             |......|...:..|..                  
  Rat   289 NECGKVFSSHSNLNTHQ-------------AIHTGEKPYKCSECGKVFTQNSHLANHWRTHTGEK 340

  Fly   244 ---VNPAATATPASSATPTTNLAAAPLPSPPTVQQLPLSVIKSQPSEAMNLTITKTPPSGSRGSR 305
               .|....|....|:. ||:||......|...::  ...:.:|.|...|               
  Rat   341 PYKCNECGKAFSVYSSL-TTHLAIHTGEKPYKCEE--CGKVFTQNSHLAN--------------- 387

  Fly   306 NRSSRRKTHSPKKVQHTE--GSDVSDEDSPQKRLKENELILANYNAVAAAVVAAASLTGNPP--- 365
                .|..||.:|....|  |...:...:           ||.:..|.         ||..|   
  Rat   388 ----HRGIHSGEKPYKCEECGKHFNQTSN-----------LARHWRVH---------TGEKPYKC 428

  Fly   366 ---GQPDSLQQRLCASLLQQQHQEQLFAVMSATAAAAAAV--GTSSATTTTTTTTGTMMAHPY-- 423
               |:..|::..|.:      ||...........|....|  .|||.:......||   ..||  
  Rat   429 SECGKAFSVRSSLTS------HQVIHTGEKPYKCAECGKVFSQTSSLSIHQRIHTG---EKPYRC 484

  Fly   424 -------GNHPPSETDKRPAAPLQAVIHAAPVSIICPNCGELPGQN------HRCLSKPK-YACD 474
                   .:|....|.:        |||.......|..||::..||      ||..:..| |.|:
  Rat   485 NECGKAFNSHSNLNTHQ--------VIHTGQKPYKCLECGKVFTQNSHLANHHRTHTGEKPYKCN 541

  Fly   475 VCGKSFKMKRYLEEHFATHTGVKLHTCAFCPTEFRSKSNMYHHTKRKHKAE 525
            .|||:|.:...|..|.|.|||.|...|..|...|...|::..| :|.|..|
  Rat   542 ECGKAFSVYSSLTTHQAIHTGEKPFKCNECGKVFTQNSHLASH-RRTHTGE 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12219NP_572312.1 zf-AD 2..94 CDD:285071 6/26 (23%)
C2H2 Zn finger 140..160 CDD:275368 7/19 (37%)
COG4049 149..204 CDD:226535 14/54 (26%)
C2H2 Zn finger 168..186 CDD:275368 5/17 (29%)
C2H2 Zn finger 473..493 CDD:275370 8/19 (42%)
C2H2 Zn finger 501..522 CDD:275370 6/20 (30%)
LOC100365363XP_006228060.2 KRAB 8..68 CDD:214630
SFP1 <143..221 CDD:227516 9/49 (18%)
C2H2 Zn finger 148..168 CDD:275368
C2H2 Zn finger 176..196 CDD:275368 6/21 (29%)
COG5048 200..575 CDD:227381 94/461 (20%)
C2H2 Zn finger 204..224 CDD:275368 3/24 (13%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
C2H2 Zn finger 260..280 CDD:275368 5/19 (26%)
C2H2 Zn finger 288..308 CDD:275368 5/32 (16%)
C2H2 Zn finger 316..336 CDD:275368 1/19 (5%)
C2H2 Zn finger 344..364 CDD:275368 7/20 (35%)
C2H2 Zn finger 372..392 CDD:275368 4/40 (10%)
C2H2 Zn finger 400..420 CDD:275368 4/30 (13%)
C2H2 Zn finger 428..448 CDD:275368 5/25 (20%)
C2H2 Zn finger 456..476 CDD:275368 5/19 (26%)
C2H2 Zn finger 484..504 CDD:275368 3/27 (11%)
C2H2 Zn finger 512..532 CDD:275368 7/19 (37%)
C2H2 Zn finger 540..560 CDD:275368 8/19 (42%)
C2H2 Zn finger 568..588 CDD:275368 6/20 (30%)
zf-H2C2_2 580..604 CDD:404364 4/13 (31%)
C2H2 Zn finger 596..615 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335932
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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