DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3815 and CG8569

DIOPT Version :9

Sequence 1:NP_572311.1 Gene:CG3815 / 31571 FlyBaseID:FBgn0029861 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_610795.1 Gene:CG8569 / 36376 FlyBaseID:FBgn0033752 Length:608 Species:Drosophila melanogaster


Alignment Length:648 Identity:109/648 - (16%)
Similarity:194/648 - (29%) Gaps:257/648 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DQDPNASLSIMEQIKQLIRPPPNEDEKMM-------QRSTNTKHPYYR-----RPGRGHN----- 52
            |..|:|....|:::|:.:..|....|:.:       ..|.:.|:...|     |.|.|.:     
  Fly     4 DIPPSAIRIWMDKLKKGVGQPATVLERSLLNLMSAEAASLSVKNATERGILVARAGGGRSKRLAL 68

  Fly    53 --------------HDYCDACEEGGNLLCCDRCPSSFHLQC--HDPPLSEEDIPSGQWLCHSCRM 101
                          ..:|..|...|.:..|..|..|||..|  .||......:||.:...:...:
  Fly    69 AFCQKVSRLPSSPIDPFCFECHLPGAVKKCISCHRSFHENCQRQDPEKPNYSVPSDKGQPYQFPV 133

  Fly   102 SKLSQPPASSSKASSVERVPSAGSGSRANTP---SSGDLESIPLKIRNLRKRSNSE--------- 154
            ::|...|.::::.....:.|         ||   .:.::....|...:..|..|.|         
  Fly   134 NELDNQPLNNTQNLETPQTP---------TPLLDHNSNINQTLLATTDFLKHENIEWDDDVFFVC 189

  Fly   155 --RNSTEKLLAKMPMSIQRALDPNK-------------------KPTPLD--------------- 183
              :.:.::.|.::...:|.:||.::                   .|..||               
  Fly   190 EQKGARQRKLPRIKDELQSSLDSDEGSDLERCTHCRLLALAALHNPPQLDKQELGCLLKYSWDQH 254

  Fly   184 ------DVIR-AATMMNPQQFSLPPELELHTQFPGNGKVQPVQQTHPPSGNGGNRRCAGNQRRNS 241
                  ||.: .|...|.:..:|...|...|:..|.|.::              |..|..:....
  Fly   255 HSWISMDVAKYMAKHWNERDKALVKRLLFKTKILGLGDIE--------------RNIAAAKYTYL 305

  Fly   242 KPFELDAQGLVPLPAKTCFYCTRSCKRAPLISCDYCPLYFHQDCLDPPLTALPAGLWM------- 299
            ..|.:|...|....|                      ::|.|..::...|.     |:       
  Fly   306 TEFLMDLLDLQHNMA----------------------VFFGQKSVEYNATK-----WLMRDVTHD 343

  Fly   300 ------CPNHAENFIDANMTNSISATERVRLWNRFHQPL--DHENVKLEFFRRVNTRNPPFRTKR 356
                  ||:......:|::::         ||  |.:|.  .||   |.|.::|.  :||:    
  Fly   344 IREIRRCPDCYRYSNEASLSD---------LW--FAKPCLQRHE---LVFAKQVG--SPPW---- 388

  Fly   357 NLRARAHIEVPAIVRYHYDHPPPLLPSMRQTLRYD---------------------------RVK 394
                      ||.|         :..|.||.::||                           .:|
  Fly   389 ----------PAKV---------MSVSKRQPIKYDVRFFGGTHSRALISERDITPIESDIQSHIK 434

  Fly   395 RRNN--LPTEVEEI-----------------SRESVTESLLKDLEALRTAHAKFREIQREFGTLE 440
            .||:  |...::|:                 :..:|.|:|:|    :..:|..        .:.|
  Fly   435 PRNSRALSAAIKELQCHMMLSHYSASLFGFHADPTVAENLIK----VALSHCT--------ESTE 487

  Fly   441 TAIDGDSDSDPSPEEKRTETNTPADKVNGEVDTENPNTESNAQASEQPSVVKVESKTSLEVEA 503
            |:..|.....|:|.       ||....|..::....||.|.......|..|..:|.|:..::|
  Fly   488 TSASGKRGRPPTPA-------TPGAAKNRRLNNTTSNTSSPVPIRGIPDSVAYDSLTAEILQA 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3815NP_572311.1 PHD1_PHF12 55..99 CDD:277008 13/45 (29%)
BAH 75..198 CDD:295389 27/179 (15%)
PHF12_MRG_bd 175..211 CDD:293342 10/76 (13%)
PHD2_PHF12_Rco1 259..303 CDD:277009 6/56 (11%)
FHA <732..>765 CDD:238017
CG8569NP_610795.1 PHD_SF 85..120 CDD:304600 11/34 (32%)
Bromo_ZMYND11 243..350 CDD:99924 19/147 (13%)
BS69_related 366..451 CDD:99902 23/114 (20%)
zf-MYND 570..604 CDD:280009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450445
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.