DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Src42A

DIOPT Version :10

Sequence 1:NP_001025210.1 Gene:Csk / 315707 RGDID:1308800 Length:450 Species:Rattus norvegicus
Sequence 2:NP_001400996.1 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1606 Species:Drosophila melanogaster


Alignment Length:404 Identity:166/404 - (41%)
Similarity:229/404 - (56%) Gaps:39/404 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat    74 GTKLSLMPWFHGKITREQAERLLYPPET--GLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHAS 136
            |..|:...|:..||.|.:||:.|..||.  |.||:|:|.:...||:|.|.....|:||||.    
  Fly  1202 GEFLNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIR---- 1262

  Rat   137 KLSIDE-------EVYFENLMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQDEF----------- 183
              .:||       ...|..|.:|||||:.|:||||..|.||.|...:.:...|.           
  Fly  1263 --QLDEGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQTNSFSGVFEIEKPVTEGLSHR 1325

  Rat   184 YRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKNDA-TAQAFLAEASVMTQLRHS 246
            .|..|.::...||.::.:|.|:||||..|.:.. ..||:|.:|:.. ..:.|||||.:|.:|||:
  Fly  1326 TRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHT 1390

  Rat   247 NLVQLLGV-IVEEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEG 307
            .|:||..| .|||.  :||:||.|..|||::||::   :||| |....|:..:..:...|.|||.
  Fly  1391 KLIQLYAVCTVEEP--IYIITELMKHGSLLEYLQAIAGKGRS-LKMQTLIDMAAQIAAGMAYLES 1452

  Rat   308 NNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTG-KLPVKWTAPEALREKKFSTKSD 368
            .|::|||||||||||.:.|:.|::||||.   ||.......| :.|:|||||||....|||.|||
  Fly  1453 QNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSD 1517

  Rat   369 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTF 433
            ||||||||.|:.::||:|||.:...:|:.:||.||:|..|..|.|.:|::|..|||.|...||||
  Fly  1518 VWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTF 1582

  Rat   434 LQLREQLEHIRTHE 447
            ..|:.:||...|.:
  Fly  1583 ETLQWKLEDFYTSD 1596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001025210.1 Interaction with PTPN22. /evidence=ECO:0000250|UniProtKB:P41240 9..70
SH3_CSK 11..67 CDD:212703
SH2_csk_like 78..175 CDD:198190 41/105 (39%)
PTKc_Csk 188..443 CDD:133213 120/264 (45%)
Src42ANP_001400996.1 SH2_Src_Src42 1210..1301 CDD:198233 38/96 (40%)
PTKc_Frk_like 1328..1596 CDD:270653 121/270 (45%)
Blue background indicates that the domain is not in the aligned region.

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