Protein Alignment mldr and PRORP3

DIOPT Version :9

• Sequence 1: NP_001245549.1
• Gene: mldr / 31568
• FlyBaseID: FBgn0029858
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_193921.2
• Gene: PRORP3 / 828279
• AraportID: AT4G21900
• Length: 576
• Species: Arabidopsis thaliana
• Alignment Length: 622
• Identity: 124/622 - (19%)
• Similarity: 229/622 - (36%)
• Gaps: 176/622 - (28%)

  Fly    27 KRRPQPGSL-----PADRLDQLRSDLFERRHELSGAEWTEVRRSLVDGYKHINGHNVDAVILGVC 86
            |:...|.||     |.  |.|:|. |..||..:|.:.:...:  ||.    :..|.|:..|. .|
plant     4 KKPSLPSSLLCAVPPC--LSQIRL-LIPRRVRVSSSTFANAK--LVT----LRNHTVNLHIY-YC 58

  Fly    87 SA-----------------PNQLSLA-----KSYVEFLRSRGSKPNAATLGRLLRVYNAAY--HE 127
            |.                 ||:....     ||.:..|.|...:.:   |...|.:|:||.  .:
plant    59 SMAGTDNRRSRHDDESPKNPNKKKKGNRNPEKSLLINLHSCSKRKD---LSAALALYDAAITSSD 120

  Fly   128 RPLSEAEQSEILQICRSLQAEHETLDASSCENVIHGLVATSGDDWQRGLPLLEMMKVTS--TPSV 190
            ..|::.....:|.:|.:.      :...|.:.|.          ..||..:.:.| |:|  :|:.
plant   121 IRLNQQHFQSLLYLCSAF------ISDPSLQTVA----------IDRGFQIFDRM-VSSGISPNE 168

  Fly   191 AAYSALAEKAFSVATPEQELAWRLLEEMATAR--KPPKCEVYL-ALL------------------ 234
            ::.:|:|..|  .|..:.:.|::|::::....  ..|:...|. |||
plant   169 SSVTAVARLA--AAKGDGDYAFKLVKDLVAVGGVSVPRLRTYAPALLCFCDTLEAEKGYEVEDHM 231

  Fly   235 --NRLANETAQLPAQLSL------------LLQFLERHEILVSQRVAIRLQE------------- 272
              :.:..|.|::.|.|.:            .||.|......||:..:..::|
plant   232 DASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRECVGCVSEETSKAIEEWFYGVKASEVSDN 296

  Fly   273 -LSSQVPQLLHTRTTHLGG----------------------LGKCQSCQQHLQPVAISDEEFRQL 314
             :.|.: :||.......||                      .|||.||.:||..|..::.|....
plant   297 GIGSDI-ELLRAAVLKNGGGWHGLGWVGEGKWIVKKGNVSSAGKCLSCDEHLACVDTNEVETEDF 360

  Fly   315 SECFLERVLIRRDVFQRSTP-EEVARFKKFVEKTAPYDCVIDGLNVA-----YSTGTKKTPQQLA 373
            ....:...:.|:.......| .:.:.|::::||...|:.::||.|:.     ::.|....| ||.
plant   361 VNSLVTLAMERKAKMNSCEPMADFSEFQEWLEKHGDYEAILDGANIGLYQQNFADGGFSLP-QLE 424

  Fly   374 KLVATVVRHFREQDKRVLVLGREHMRNWSKQAMH------YVHCNASLFLTSNLSHDDPFLLYAT 432
            .:|..:......:.:.:::|.::.:....:...|      :::.|. |:.|...|:||.:.|||.
plant   425 AVVKELYNKSGSKKQPLILLHKKRVNALLENPNHRNLVEEWINNNV-LYATPPGSNDDWYWLYAA 488

  Fly   433 LRSGQETDFFSRDLMRSHAFHLGTELKPIFRRWQQEHQ--FSLV------TQTQTGQIIVKEPVR 489
            .:  .:....:.|.||.|.|.|.:  ...|::|::.||  |:.|      .......::::|..:
plant   489 AK--LKCLLVTNDEMRDHIFELLS--NSFFQKWKERHQVRFTFVKGCLKLEMPPPFSVVIQESEK 549

  Fly   490 HRLCAHQVADTWHVPYCAQYTPHPTDSFEVPANWLCI 526
                     .:||||..:|      |..|...:|:||
plant   550 ---------GSWHVPITSQ------DKEESLRSWMCI 571

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mldr	NP_001245549.1	PRORP	288..525	CDD:293558	57/278 (21%)
PRORP3	NP_193921.2	PPR_long	89..292	CDD:407303	41/224 (18%)
		PPR repeat	96..119	CDD:276811	7/25 (28%)
		PPR repeat	125..162	CDD:276811	8/53 (15%)
		PPR repeat	168..195	CDD:276811	6/28 (21%)
		PPR repeat	205..231	CDD:276811	4/25 (16%)
		RNase_Zc3h12a	334..570	CDD:418913	55/256 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	59	1.000	Domainoid score	I3890
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1247650at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		oto3017
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR13547
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	6.020