Protein Alignment mldr and PRORP2

DIOPT Version :9

• Sequence 1: NP_001245549.1
• Gene: mldr / 31568
• FlyBaseID: FBgn0029858
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_179256.3
• Gene: PRORP2 / 816166
• AraportID: AT2G16650
• Length: 528
• Species: Arabidopsis thaliana
• Alignment Length: 623
• Identity: 113/623 - (18%)
• Similarity: 202/623 - (32%)
• Gaps: 223/623 - (35%)

  Fly    41 DQLRSDLFERRHELSGAEWTEVRRSLVDGYKHINGHNVDAVI---LGVCSAPNQLSLAKSYVEFL 102
            ||.||    |||:.|.:...:.::.         ..|.:..:   |..||....||.|
plant     5 DQHRS----RRHDESSSRPNKKKKV---------SRNPETNLLFNLNSCSKSKDLSAA------- 49

  Fly   103 RSRGSKPNAATLGRLLRVYNAAY--HERPLSEAEQSEILQICRS----LQAEHETLDASSCENVI 161
                           |.:|:||.  .|..||:.....:|.:|.:    :..::..:|
plant    50 ---------------LALYDAAITSSEVRLSQQHFQTLLYLCSASITDISLQYLAID-------- 91

  Fly   162 HGLVATSGDDWQRGLPLLEMM----------KVTSTPSVAAYSALAEKAFSVATP---------- 206
                        ||..:.:.|          .|||...:||.....:.||.|...
plant    92 ------------RGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFVSVGGVSIP 144

  Fly   207 ----------------EQELAWRLLEEMATARKPPKCEVYLALLNRLANETAQLPAQLSL----- 250
                            |.|..:.:.|.|..|              .:|.|.|::.|.|.:
plant   145 RLRTYAPALLCFCEKLEAEKGYEVEEHMEAA--------------GIALEEAEISALLKVSAATG 195

  Fly   251 -------LLQFLERHEILVSQRVAIRLQE--------------LSSQVPQLLHTRTTHLGG---- 290
                   .|..|..:...||:.....::|              :.|.|..|......:.||
plant   196 RENKVYRYLHKLREYVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGGWHGH 260

  Fly   291 -----------------LGKCQSCQQHLQPVAISDEEFRQLSECFLERVLIRRDVFQRSTPEEV- 337
                             .|:|.||.:.|..|..::.|.::..:..:...:.|:..........|
plant   261 GWVGEGKWTVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKMNSCETNVVF 325

  Fly   338 ARFKKFVEKTAPYDCVIDGLNVA-YSTGTKKTPQQLAKLVATVVRHFREQDKR---VLVLGREHM 398
            :.|:.::||...|:.::||.|:. |..........|::|.:.:...:||....   :::|.:..:
plant   326 SEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQLESVMKELYRESGNNKWPLILLHKRRV 390

  Fly   399 RNWSKQAMH------YVHCNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSHAFH-LGT 456
            :...:...|      :: .|..|:.|...|:||.:.|||..:  .:....:.|.||.|.|. ||:
plant   391 KTLLENPTHRNLVEEWI-SNGVLYATPPGSNDDWYWLYAAAK--LKCLLVTNDEMRDHIFELLGS 452

  Fly   457 ELKPIFRRWQQEHQ-----------------FSLVTQ-TQTGQIIVKEPVRHRLCAHQVADTWHV 503
               ..|::|::.||                 ||:|.| ::.|                   :||.
plant   453 ---TFFQKWKERHQVRYTFVKGNLKLEMPSPFSVVIQESEKG-------------------SWHF 495

  Fly   504 PYCAQYTPHPTDSFEVPANWLCIQMKEQTIPATKTKTK 541
            |...:      ::.|....|:||. ::..:.:.|:..|
plant   496 PVSCE------NNEESSRTWMCIS-RQSILDSPKSNGK 526

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mldr	NP_001245549.1	PRORP	288..525	CDD:293558	55/287 (19%)
PRORP2	NP_179256.3	PPR_long	20..233	CDD:407303	43/277 (16%)
		PPR repeat	37..60	CDD:276811	10/44 (23%)
		PPR repeat	109..138	CDD:276811	8/28 (29%)
		PPR repeat	146..173	CDD:276811	3/26 (12%)
		PPR repeat	181..209	CDD:276811	5/27 (19%)
		PIN_PRORP-Zc3h12a-like	340..466	CDD:350238	30/131 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	59	1.000	Domainoid score	I3890
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1247650at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR13547
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.020