DRSC/TRiP Functional Genomics Resources

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Protein Alignment mldr and coa-6

DIOPT Version :9

Sequence 1:NP_001245549.1 Gene:mldr / 31568 FlyBaseID:FBgn0029858 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001366833.1 Gene:coa-6 / 172906 WormBaseID:WBGene00013893 Length:471 Species:Caenorhabditis elegans


Alignment Length:373 Identity:63/373 - (16%)
Similarity:118/373 - (31%) Gaps:112/373 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LRVYNAAYH-----ERPLSEAEQSEILQICR--SLQAEHETLDASSCENVIHGLVATSGDDWQRG 175
            :|.....||     |..|:.....:.::.|:  .:|.||:..                       
 Worm    96 MRYIAVVYHSINDEEARLTLKRLKDNIEKCKIHKMQEEHDKF----------------------- 137

  Fly   176 LPLLEMMKVTSTPSVAAYSALAEKAFSVATP-EQELA---WRLLEEMATARKPPKCEVY---LAL 233
                 .|.:....::..:|.:..|...|... .:|||   |:.:::: .:|.|...::|   .|.
 Worm   138 -----RMSLDQDAAIPDFSKVMHKQDLVRCYFRRELANKKWKTVKQL-LSRYPKNIKLYEHISAF 196

  Fly   234 LNRLANETAQLPAQLSLLL---------QFLERHE---------------ILVSQRVAIRLQELS 274
            |:....|.|: |..:..:.         :|:|:.|               :.|...:.::...:|
 Worm   197 LDAAKLENAE-PIDIMQVFMNYAQVDNPRFMEQTEFDEIFKQVAEACSAKVSVKSELDVKKTYIS 260

  Fly   275 SQVPQLLHTRTTHLGGLGKCQSCQQHLQPVAISDEEFRQLSECFLERVLIRRDVFQRSTPEEVAR 339
            .:..::|..         ||....:.::...:..||:.:          ||:.|.:......:..
 Worm   261 EKEGKILKE---------KCDKYVESMKEGFVKKEEYEK----------IRQKVLRWMEERNIRN 306

  Fly   340 FKKFVEKTAPYDCVIDGLNVAYSTGTKKTPQQLAKL--VATVVRHFREQDKRVLVLGREHMRNWS 402
            .:..|        |:|.||..|....|:.....:|.  |....|....|..|..|:.|       
 Worm   307 GENVV--------VVDALNFGYGVDPKEWDDISSKFEHVFFATRRISNQKLRKEVMER------- 356

  Fly   403 KQAMHYVHCNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSH 450
                    .|.:......||.||..::...|..|.||...:.|....|
 Worm   357 --------YNGNALFCDKLSTDDLIIIRMALEFGPETSIVTNDKYTDH 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldrNP_001245549.1 PRORP 288..525 CDD:293558 32/165 (19%)
coa-6NP_001366833.1 PIN_SF 311..411 CDD:421694 25/109 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156561
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13547
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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