DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and AT5G20000

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_197500.1 Gene:AT5G20000 / 832122 AraportID:AT5G20000 Length:419 Species:Arabidopsis thaliana


Alignment Length:401 Identity:189/401 - (47%)
Similarity:255/401 - (63%) Gaps:22/401 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TPMPDNLRVKALSE-----YRKKLLEH-KEIE----------GRLKEKREEIKDLTKLYDKSEND 54
            |.|.:...||..:.     ..|..|:| .|::          .||:.:|.|:....::.   ..:
plant    13 TAMEETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRML---REE 74

  Fly    55 LKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYL 119
            |:.||..|..||||:|.:.::|.:||.....:|||...:.:|..||...|||||...:..:...|
plant    75 LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVL 139

  Fly   120 PREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPP 184
            |.:|||||..|..|...|.||..||||..||:|::||||||:.:||||..:||..|||.||||||
plant   140 PSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204

  Fly   185 GTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 249
            ||||||||||||...|..|::|..|.:|.|||||.:|::||:|..||:|.|.||||||||:||..
plant   205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269

  Fly   250 RFSEGT-SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN 313
            |...|: :.|.|:|||::|||||:|||::..::|::|||||.|.||.|||||||:|||||.|.||
plant   270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334

  Fly   314 EQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKA 378
            |::|.:|||||:.|:.....||.:.|.:..:..:||:|:.||||||:||:|..|.:|.||||..|
plant   335 EESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399

  Fly   379 VRKV--SDNKK 387
            |.||  .|.:|
plant   400 VAKVMKKDTEK 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 186/392 (47%)
AT5G20000NP_197500.1 PRK03992 36..413 CDD:179699 184/378 (49%)

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