Protein Alignment Rpt4 and psmc1

DIOPT Version :9

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_001039154.1
• Gene: psmc1 / 733980
• XenbaseID: XB-GENE-950579
• Length: 440
• Species: Xenopus tropicalis
• Alignment Length: 382
• Identity: 164/382 - (42%)
• Similarity: 248/382 - (64%)
• Gaps: 19/382 - (4%)

  Fly    12 LRVKALSEY---RKKLLEHKEIEGRLKEKREEIKDLTKLYDKSE-NDLKAL-QSVGQIVGEVLKQ 71
            |:::.:.:|   .::.:.::|....|:||:||        ::|: :||:.. .|||     .|::
 Frog    63 LKLERIKDYLLMEEEFIRNQEQMKPLEEKQEE--------ERSKVDDLRGTPMSVG-----TLEE 114

  Fly    72 LTEDKFIVKATN-GPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 135
            :.:|...:.:|: |..:.|.....:||..|:.|..|.|:.....::..|..:.||||..|..|..
 Frog   115 IIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKA 179

  Fly   136 GDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 200
            ...||:.||||.:||:|::|.:||||.:||.:..:||.||||.:|||||||||||||:|||:|..
 Frog   180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244

  Fly   201 ANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 265
            |.||:||.|.::.||:|:..:|:||:|..|.:|.|.|:|:|||||||.:|:...:..:||||||:
 Frog   245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTM 309

  Fly   266 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAK 330
            :|||||:|||||.|.||:||||||.:||||||:||||:|||||.|||:|:.:..|.:||..::..
 Frog   310 LELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374

  Fly   331 HGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKK 387
            ..::..:.::...|:.:|||::.:||||||.|:|..|..|..|||.|:...|...|:
 Frog   375 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQ 431

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	163/381 (43%)
		AAA	179..311	CDD:278434	83/131 (63%)
psmc1	NP_001039154.1	PTZ00361	1..440	CDD:185575	164/382 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010