Protein Alignment Rpt4 and psmc5

DIOPT Version :10

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_989358.1
• Gene: psmc5 / 394988
• XenbaseID: XB-GENE-999928
• Length: 414
• Species: Xenopus tropicalis
• Alignment Length: 357
• Identity: 179/357 - (50%)
• Similarity: 240/357 - (67%)
• Gaps: 5/357 - (1%)

  Fly    33 RLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDK 97
            ||:.:|.|:....:|.   ..:|:.||..|..||||::.:.:.|.:||.....::||...:.:|.
 Frog    52 RLQAQRNELNAKVRLL---REELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDI 113

  Fly    98 AKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLL 162
            ..:....||||...:.|:.:.||.:|||||..|..|...|.||..||||..||:|::||||||:.
 Frog   114 NDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 178

  Fly   163 NPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMF 227
            :||||..:||..|||.||||||||||||||||||...|..|::|..|.:|.|:|||.||::||:|
 Frog   179 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 243

  Fly   228 NYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 292
            ..||:|.|.||||||||:||..|...|:..|.|:|||::|||||:|||::...:|:||||||.|.
 Frog   244 VMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI 308

  Fly   293 LDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTE 357
            ||.|||||||:|||||.|.|||:|||:|||||:.|:.....|:...|.:|....:||:::.||||
 Frog   309 LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTE 373

  Fly   358 AGLFAIRAEREYVIQEDFMKAVRKV--SDNKK 387
            ||::|:|..|.:|.||||..||.||  .|::|
 Frog   374 AGMYALRERRVHVTQEDFEMAVAKVMQKDSEK 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	178/355 (50%)
psmc5	NP_989358.1	PRK03992	32..408	CDD:179699	179/357 (50%)