Protein Alignment Rpt4 and psmc5

DIOPT Version :9

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_989358.1
• Gene: psmc5 / 394988
• XenbaseID: XB-GENE-999928
• Length: 414
• Species: Xenopus tropicalis
• Alignment Length: 357
• Identity: 179/357 - (50%)
• Similarity: 240/357 - (67%)
• Gaps: 5/357 - (1%)

  Fly    33 RLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDK 97
            ||:.:|.|:....:|.   ..:|:.||..|..||||::.:.:.|.:||.....::||...:.:|.
 Frog    52 RLQAQRNELNAKVRLL---REELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDI 113

  Fly    98 AKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLL 162
            ..:....||||...:.|:.:.||.:|||||..|..|...|.||..||||..||:|::||||||:.
 Frog   114 NDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 178

  Fly   163 NPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMF 227
            :||||..:||..|||.||||||||||||||||||...|..|::|..|.:|.|:|||.||::||:|
 Frog   179 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 243

  Fly   228 NYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 292
            ..||:|.|.||||||||:||..|...|:..|.|:|||::|||||:|||::...:|:||||||.|.
 Frog   244 VMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI 308

  Fly   293 LDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTE 357
            ||.|||||||:|||||.|.|||:|||:|||||:.|:.....|:...|.:|....:||:::.||||
 Frog   309 LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTE 373

  Fly   358 AGLFAIRAEREYVIQEDFMKAVRKV--SDNKK 387
            ||::|:|..|.:|.||||..||.||  .|::|
 Frog   374 AGMYALRERRVHVTQEDFEMAVAKVMQKDSEK 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	179/357 (50%)
		AAA	179..311	CDD:278434	83/131 (63%)
psmc5	NP_989358.1	RPT1	15..412	CDD:224143	179/357 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010