Protein Alignment Rpt4 and psmc4

DIOPT Version :10

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_956044.2
• Gene: psmc4 / 326884
• ZFINID: ZDB-GENE-030131-5083
• Length: 418
• Species: Danio rerio
• Alignment Length: 389
• Identity: 167/389 - (42%)
• Similarity: 245/389 - (62%)
• Gaps: 2/389 - (0%)

  Fly     7 PMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQ 71
            |.|::|. ...|.|:|...|.:.:|.:.:..::|.|:|.|.:..::.::|.:||:..::|:.|:.
Zfish    32 PEPEDLE-DLYSIYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95

  Fly    72 LTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 136
            :.::..||.:|.|..|.|.....:|:..||....|||...:..::..||.|.|..:..::.:...
Zfish    96 VDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160

  Fly   137 DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 201
            ||.||.|||:..|.:|:||.:||||.:.||:.::||.||:|.|:|||||.|||:||:|||....|
Zfish   161 DVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 225

  Fly   202 NFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 266
            .|::||.|..|.||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||.|:
Zfish   226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290

  Fly   267 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH 331
            ||||||||||....||:||||||.||||||||||||||||||.|||:.:.:..:......|:...
Zfish   291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLS 355

  Fly   332 GEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESKLDYK 395
            .|:|.|..|...|..:|||:.::|.|||:.|:|..|..|:.:||.||.:.|....:.|.:. ||
Zfish   356 EEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF-YK 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	161/373 (43%)
psmc4	NP_956044.2	PTZ00454	34..418	CDD:240423	164/385 (43%)