Sequence 1: | NP_572308.3 | Gene: | Rpt4 / 31567 | FlyBaseID: | FBgn0028685 | Length: | 397 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_150239.2 | Gene: | Psmc2 / 25581 | RGDID: | 3428 | Length: | 433 | Species: | Rattus norvegicus |
Alignment Length: | 387 | Identity: | 176/387 - (45%) |
---|---|---|---|
Similarity: | 251/387 - (64%) | Gaps: | 19/387 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 LRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSEN-----------DLKALQSVGQI- 64
Fly 65 VGEVLKQLTED----KFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 125
Fly 126 LVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTL 190
Fly 191 LARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 255
Fly 256 SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 320
Fly 321 LKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV 382 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rpt4 | NP_572308.3 | RPT1 | 13..395 | CDD:224143 | 175/386 (45%) |
AAA | 179..311 | CDD:278434 | 85/131 (65%) | ||
Psmc2 | NP_150239.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..22 | ||
RPT1 | 23..430 | CDD:224143 | 176/387 (45%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D298123at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |