Protein Alignment Rpt4 and Psmc3

DIOPT Version :9

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_032974.2
• Gene: Psmc3 / 19182
• MGIID: 1098754
• Length: 442
• Species: Mus musculus
• Alignment Length: 393
• Identity: 165/393 - (41%)
• Similarity: 234/393 - (59%)
• Gaps: 28/393 - (7%)

  Fly    18 SEYRKKLLEHKEIEGRLKEKREEIK----------DLTKLYDKSENDLKA------LQSVGQIVG 66
            ||..:...|.:.::.::||..|:||          ::.:|.|...||.:.      |.|..:...
Mouse    60 SEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKC 124

  Fly    67 EVLKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 131
            .|:|..|...:.:.       |:|.   :|..|||.|..|.::..:..|:..||.|.|..|..|.
Mouse   125 AVIKTSTRQTYFLP-------VIGL---VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 179

  Fly   132 HEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVA 196
            .::.....||.||||..||:||.|.|.||:.:.|.|..:||.||||.|:||||||||||||||.|
Mouse   180 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 244

  Fly   197 SQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREI 261
            :|..|.|||:....:|..:||:.|:|:|:.|..|::..|.|||:||:||||.:||....:.|||:
Mouse   245 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREV 309

  Fly   262 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAL 326
            |||::|||||:|||....|||:|.||||.|.|||||||.||||||||.|:|||:||..|::||:.
Mouse   310 QRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSR 374

  Fly   327 KIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESK 391
            |:....:::||.:.:.:|:||||..:.||.|||:.|:|.....:..||:|:.:.:|...||  :.
Mouse   375 KMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKK--AN 437

  Fly   392 LDY 394
            |.|
Mouse   438 LQY 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	165/393 (42%)
		AAA	179..311	CDD:278434	79/131 (60%)
Psmc3	NP_032974.2	RPT1	28..435	CDD:224143	161/384 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810