Protein Alignment Rpt4 and rpt-1

DIOPT Version :9

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_506005.1
• Gene: rpt-1 / 179641
• WormBaseID: WBGene00004501
• Length: 435
• Species: Caenorhabditis elegans
• Alignment Length: 421
• Identity: 176/421 - (41%)
• Similarity: 256/421 - (60%)
• Gaps: 49/421 - (11%)

  Fly     8 MPDNL-----------------RVKALSE-------------YRKKLLEHKEIEGRLKEKREEIK 42
            |||:|                 ..:||.|             |.::|   |.::..::...:::.
 Worm     1 MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQL---KTLDADIENCLKKVN 62

  Fly    43 DLTKLYDKSEN-----------DLKALQSVGQI-VGEVLKQLTEDK----FIVKATNGPRYVVGC 91
            :|:.:.:....           |.:|:|....: |....|.:|.||    :::......::||..
 Worm    63 ELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDL 127

  Fly    92 RRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREV 156
            ...:....::.|.||.:|.....|...||.::||.|..|..|:..|||||.:||..|||.:||||
 Worm   128 ADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREV 192

  Fly   157 IELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESAR 221
            :|.|||:||.::.:||.||||.||||||||||||.|||||::.||.|::|:.|.:|.||:||.||
 Worm   193 VETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGAR 257

  Fly   222 LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMA 286
            ::||:|..||..:.|:||.|||||:||.||.:|...|.|:|||::||:||:||||..|.:|::||
 Worm   258 MVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMA 322

  Fly   287 TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADL 351
            |||||||||||:||||||||:|..||:...|..||||||.:::...:|.|:.:.:|..|..||::
 Worm   323 TNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEI 387

  Fly   352 RNVCTEAGLFAIRAEREYVIQEDFMKAVRKV 382
            |:||||||:|||||.|:...::||::|:.||
 Worm   388 RSVCTEAGMFAIRARRKVATEKDFLEAINKV 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	172/399 (43%)
		AAA	179..311	CDD:278434	84/131 (64%)
rpt-1	NP_506005.1	RPT1	29..432	CDD:224143	170/393 (43%)
		AAA	214..345	CDD:278434	83/130 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920