Sequence 1: | NP_572308.3 | Gene: | Rpt4 / 31567 | FlyBaseID: | FBgn0028685 | Length: | 397 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_499609.1 | Gene: | rpt-6 / 176661 | WormBaseID: | WBGene00004506 | Length: | 416 | Species: | Caenorhabditis elegans |
Alignment Length: | 394 | Identity: | 181/394 - (45%) |
---|---|---|---|
Similarity: | 253/394 - (64%) | Gaps: | 13/394 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 TATPMPDNLRVKALSEY--------RKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQS 60
Fly 61 VGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 125
Fly 126 LVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTL 190
Fly 191 LARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 255
Fly 256 SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 320
Fly 321 LKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV--S 383
Fly 384 DNKK 387 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rpt4 | NP_572308.3 | RPT1 | 13..395 | CDD:224143 | 179/385 (46%) |
AAA | 179..311 | CDD:278434 | 81/131 (62%) | ||
rpt-6 | NP_499609.1 | RPT1 | 10..414 | CDD:224143 | 181/394 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D298123at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |